Limimaricola variabilis: T8T21_04035
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Entry
T8T21_04035 CDS
T09625
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvr03000
]
T8T21_04035
Transcription factors [BR:
lvr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
T8T21_04035
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_24
TetR_C_11
TetR_C_27
DUF7211
Motif
Other DBs
NCBI-ProteinID:
WPY95306
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Position
complement(820421..821017)
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AA seq
198 aa
AA seq
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MKLTDKKRKDILVAAIQEFREQGFPAARVNRIAELAEVSKRTLYKHFESKELLFAAITEI
LLEEIAAVPKLRHQPDVPLREQLISAVRDYVGHLTGEQYMGLNRLVMSELLRDQDLAQAF
FAKAAMQDGPISGLIAEGMQAGALREAEPGFAAGQLLSMVKHFLIWPQFLMGAKAEVDPD
AVIADCVDMFLAHYGLGG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaactgataagaaacgaaaagatattctggtggcggcgatacaggagttccgg
gagcagggctttccggccgcgcgggtgaaccggatcgcggaactggccgaggtgtccaag
cgcacgctctacaagcatttcgaaagcaaggagctgctgttcgccgcgatcaccgagatc
ctgctcgaagagatcgcggcagtgccgaagctgcgccaccagcccgatgtgccgctgcgc
gaacagctgatctcggcggtgcgggattacgtcggccacctgaccggcgagcaatatatg
ggcctcaaccggctggtcatgtcggagctgctgcgcgatcaggatctggcgcaggccttc
ttcgccaaggccgcgatgcaggacggtccgatctcggggctgatcgcggaaggaatgcag
gcgggcgcgctgcgcgaggccgaaccgggcttcgcggcgggccagctgctgtcgatggtg
aagcatttcctgatctggccgcagttcctgatgggcgcgaaggccgaggtcgatccggat
gccgtcatcgccgactgcgtggacatgttcctcgcgcattacggcctaggaggctga
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