Limimaricola variabilis: T8T21_05110
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Entry
T8T21_05110 CDS
T09625
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8T21_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_05110
Enzymes [BR:
lvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
T8T21_05110
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T8T21_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WPY95505
LinkDB
All DBs
Position
complement(1043097..1043741)
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AA seq
214 aa
AA seq
DB search
MGGGAVTERIITHEEDVAEGAAWLAANTDHFGRLLEITGPLPLRRTPDGFSQLASAIVSQ
QVSTASARAIRGRLEAADLMRPETIATAEDEALRACGLSRQKMRYLRALAASGIDFDGLR
RAPTQEVVSTLTAVTGVGVWTAEIYAMFALGRADVFAPGDLALQEGARHLLGLEERPKER
ALREIALQWSPWRAVAARGLWEYYHHVKGREGIL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaggggctgtgacggaacggatcatcacgcatgaggaggacgtggccgagggc
gcggcctggctcgcggccaacaccgatcatttcgggcggcttttggagatcacggggccg
ctgccgctgcgccgcacgcccgatggcttttcgcagctcgcctcggcgatcgtcagccag
caggtttcgaccgcctcggcccgcgcgatccgtgggcggctggaggcggccgacctgatg
cggccggagaccatcgccactgccgaggacgaggcactgcgcgcctgcggcctgtcccgc
cagaagatgcgctacctgcgggccttggcggcgtcgggaatcgattttgacggattacgg
cgcgcgccgacgcaagaggtcgtctcgaccctcaccgccgtcaccggcgtcggtgtctgg
accgccgagatctatgccatgttcgcgctggggagggcggatgtcttcgcgccgggcgat
ctggcactgcaggagggggcgcggcatttgctgggcctcgaggagcgtcccaaggagcgc
gcgctgcgcgagattgccctgcaatggtcgccctggcgcgcggttgcggcgcgggggctg
tgggaatactaccaccacgtgaagggcagggaaggaatcctatga
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