Limimaricola variabilis: T8T21_05400
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Entry
T8T21_05400 CDS
T09625
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_05400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_05400
Transporters [BR:
lvr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
T8T21_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_29
AAA_16
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPY95559
LinkDB
All DBs
Position
complement(1104169..1105995)
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AA seq
608 aa
AA seq
DB search
MRRLSKTDANLSGQPVKGWDTIRQVIPYLWPEGEAWVKRRVVLAVSLLVVAKLIAVATPI
FYKAAVDALAGEGESAAMLLALGAAGLTVIYGLARLANVGFQQLRDVVFTPVGQRALRKL
ALRTFRHIHAMSLRYHISRKTGGLSRIIERGVKGVEFLLRFLLFSIGPLILELLLVAVVL
FFLFDVWYLVAVLVTIVLYVAFTFKVTEWRVKIRKQMNDQDTDANQKAIDSLLNFETVKY
FGAEGREAARYDSAMEKYAAAAVRTNYSLAFLNFGQSLIITGGLVVVMVMAAIGVERGDL
TVGDFVMVNAYMIQITMPLNFLGTVYREIRQALIDMAEMFDLLNQPPEVTDRPGATPIEV
TRGEIVFDEVTFGYEAARGILKGVSFTVKPGETVAIVGSSGAGKSTIGRLLFRFYDVTGG
GIRIDGQDLREVTQDSLHARIGVVPQDTVLFNDTILYNIAYGRDGATREEIEAVARAAQI
HDFIMSLPEGYDTTVGERGLKLSGGEKQRVGIARTLLKDPPILLLDEATSALDTDTEREI
QGQLRVMGQGRSVITIAHRLSTIADADRIVVLEAGKVVESGTHEHLLALEGRYAQLWSRQ
QAEEAEAA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcctgtccaagaccgacgccaatctctccggtcagccggtcaagggctgggac
acgatccggcaggtcattccctatctgtggcccgagggcgaggcttgggtgaaacggcgc
gtcgtgctcgccgtgtcgctgctcgtcgtggccaagctgatcgccgtggcgacgccgatt
ttctacaaggcggccgtcgacgcgctggcgggcgagggcgagagcgcggcgatgctgctg
gctctcggtgcggcgggactgacggtgatctacggtctcgcccggctcgccaatgtcggc
ttccagcaactgcgcgacgtggtgttcaccccggttggccagcgggcgctgcgcaagctc
gccctgcgcaccttccggcacatccatgcgatgagcctgcgctaccacatcagccgcaag
accggtggtctcagccggatcatcgagcgcggggtgaagggcgtcgagttcctgctgcgc
ttcctgctgttctcgatcggaccgttgatcctcgaattgctgctggtcgcggtcgtgctc
ttcttcctgttcgacgtatggtatctcgtggccgttctggtcacgatcgtcctctacgtc
gccttcaccttcaaggtgacggagtggcgggtgaagatccgcaagcagatgaacgaccag
gataccgacgccaaccagaaggcgatcgacagcctgctcaacttcgaaacggtcaagtat
ttcggcgccgagggccgcgaggcggcgcgctacgactctgcgatggagaaatacgcggcc
gcggcggtgcggaccaactactcgctcgccttcctcaatttcggccagtcgctgatcatc
accggcgggctcgtcgtggtcatggtgatggcggccatcggcgtcgagcggggcgatctg
acggtgggcgatttcgtcatggtcaacgcctacatgatccagatcaccatgccgctcaac
ttcctgggcaccgtctaccgcgagatccggcaggcgctgatcgacatggccgagatgttc
gacctgctgaaccagccgcccgaggtgacggatcggccgggcgccacgccgatcgaggta
acgcgcggcgagatcgtcttcgacgaggtcaccttcggctacgaggcggcgcgcggcatc
ctcaagggcgtgagcttcaccgtgaagccgggcgaaaccgtcgccatcgtcggctcctcc
ggtgccgggaaatcgaccatcggccggcttctgttccgcttctacgacgtgacgggtggc
gggatccggatcgacggtcaggacctgcgcgaggtcacgcaggacagcctgcacgcccgg
atcggcgtggtgccgcaggacacggtgctgttcaacgacacgatcctctacaacatcgcc
tatggccgcgacggcgccacccgcgaggaaatcgaggcggtggcgcgcgccgcgcagatc
cacgacttcatcatgtcgctgccggagggctacgacaccaccgtgggtgagcgggggctg
aagctttcgggcggcgagaagcagcgcgtcggcatcgctcgcacgctgctcaaggatccg
ccgatcctgctcctggacgaagcgacgagcgcgctcgacaccgacaccgagcgcgagatc
cagggccagttgcgggtgatggggcagggccgatcagtgatcaccatcgcacatcgcctg
tccaccattgcagatgccgatcgcatcgtcgtgctggaggccggaaaagtggtggaatcc
ggcacgcatgagcatcttctggcgctcgaggggcggtatgcgcagctctggtcgcgccag
caggccgaggaagccgaggccgcgtga
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