KEGG   Limimaricola variabilis: T8T21_05820
Entry
T8T21_05820       CDS       T09625                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lvr  Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lvr02048]
    T8T21_05820
Enzymes [BR:lvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     T8T21_05820
Prokaryotic defense system [BR:lvr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   T8T21_05820
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD AAA_11 GutM
Other DBs
NCBI-ProteinID: WPY95636
LinkDB
Position
1176038..1179007
AA seq 989 aa
MFEAHTPADIHQEKVFEAHIVSCLTSKQGYLERDPATDYDVAYALDRDLLFRFLRDTQPE
AWQTLVDHYSTQAEAEVLKRLEKALKEQPTHQVMRQGIKLVPNINIKLCYFKPASNLNPD
LTRLFEANILSVMRQVRYSSKNANAIDIVTFVNGIPVTTMEVKNPLTGQTFKHAEAQYRK
DRSPAGEPLLTFKRGAIVHFAVDPDNVSMTTRLMNGKTRFLPFNRGREGGAGNLDVPDEN
RIAYLYKDQPGAKAAFSREVLLDLIGRFIHLERSGGKEVLIFPRFQQLDAVRRILSDAKA
TGAGQNYLIQHSAGSGKSNTIAWTAHQIINLHDEADRPLFDTAIIVTDRLVLDRQLQNTI
SGFAQTEGVVKKIDGTSRDLKQAIEQGKRIIITTIQKFGTEHLATISGQSSKNFAVIIDE
AHSSQSGKAAQAMSDALTREKTSSEDIEDMILAHQAARGPQKNISFLAFTATPRNVTLER
FGRLGGDGNPHPFHLYSMRQAIEEGFILDVLQNYMTYSAYYKLEKAIEEDPAFKGKNAQR
AVAKYASLHPSAIGQKVEIIVEHFRRHVRGELDGQAKAMVVTQSREHAFRYWQQIKTYIE
EKGYSDLKALVAFSGDLRVDDNDWTEAAANGFPETELPQRFDTDEYQVLVVAEKYQTGFD
QPKLVAMYVDRKLAGLQAVQTLARLNRTCPGKKRTFVLDFQNTMEEIRDAFAPYFEATEL
EERTDLNQIYDLESRISASPYTIRRDVERFADTFFRGNLSGQDRVRLEGLVKEAVGRFEV
DDDEAQQEEFRQLLRSYIRFYSFVAQIVALGDPWLEKLFAYVSWLSRLLPSREVPADIAV
TEDMLQLSAFRVQKGAEGSASLQADDTKKLSAITEFGANRYTEEEERSLSEIIDSFNERH
GTNFSRDDFLRFERVNREIMDDEMTDMMRNNPADVVYGTFERAFFQGMVRMFQKDNEMRS
AVMTDKDARDQATRHFFNRAMRMATESRV
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgtttgaagctcatacccccgccgacattcatcaggagaaggtcttcgaagcacatatc
gtgagttgcctgacctcgaagcagggctatctcgaacgcgatcctgctacagactatgac
gttgcctacgcgctggaccgtgatctgctgttccgcttcctgcgggacacccaaccagag
gcgtggcaaacgctagtggatcactacagcacgcaggccgaagcagaggttctgaagcgg
ctggaaaaggccttgaaggagcagcctacccatcaggtgatgcgccaaggcatcaagctg
gttccgaacatcaatatcaagctctgctacttcaagccggcgtccaacctgaacccggac
ctgacccgactgttcgaggccaatatcctgtcggttatgcggcaggtgcggtactcctcg
aagaacgcaaacgccatcgacatcgtgaccttcgtgaacggtattcccgtcaccacgatg
gaggtgaagaacccgctgaccgggcagaccttcaagcatgccgaagcccagtaccgcaag
gatcgctctcctgctggtgagccacttctgacgttcaagcgcggggctatcgtccatttc
gccgtggatccggacaacgtgtcgatgactacccggctgatgaatggcaagacgcgcttc
ctgccctttaatcggggacgggagggcggcgccgggaacctggatgtgccggacgagaac
cgcattgcctacctctacaaggatcagccgggggcgaaggcggccttctcgcgtgaagtg
ttgctggacctcatcgggcggttcattcatttggagcggtcaggcggcaaggaggtgctg
atcttcccccggtttcagcagttggatgccgttcggcgtattctgtccgatgccaaggcc
accggcgcgggacagaactacctgatccagcacagcgcaggctcgggtaagtccaacacc
attgcttggacggctcaccagattatcaacctgcacgacgaggctgaccggcccctgttc
gatacggcgatcatcgtcactgaccgcttggttctggaccgccagttgcagaacacgatc
agtgggtttgcccaaaccgaaggcgtggtgaagaagatcgacggcacctcccgtgacctg
aaacaggccatcgagcaaggcaagcggatcatcatcaccaccatccagaagttcggtacc
gagcatctggcgaccatttcgggtcagtcctcaaagaacttcgccgtgatcatcgacgag
gcgcattcctcgcagtccggcaaggcggcacaggccatgagcgacgcgctgacacgggag
aagacctcttccgaagacatcgaggacatgatcctagctcatcaggccgcgagaggaccg
cagaagaacatctctttcctcgccttcacggcgacacctcggaacgtgaccttggagcgg
ttcggacgtctggggggggacggcaacccgcatccgttccacctctactcgatgcgtcaa
gccatcgaggaagggttcatcctggatgtcctccagaactacatgacctattcggcctac
tacaagctggagaaggcgatcgaggaggatcctgcgttcaagggcaagaatgcgcagagg
gccgtcgcgaaatacgcttctcttcacccgtctgcgattgggcagaaggtggagatcatc
gtcgaacacttccggcgtcatgtacgaggcgaactcgatggtcaggccaaggccatggtg
gtcacgcaaagccgtgaacacgcattccgctactggcagcagatcaagacttacatcgag
gagaaggggtattccgacctgaaggccttggtcgcgttctcgggcgacctgcgtgtcgat
gacaacgactggaccgaggctgcagcgaacggcttccccgagacggagctaccgcagcga
tttgatacagatgagtatcaggtgctggtcgttgccgagaaataccaaactggattcgat
cagccgaagttggtcgcgatgtatgtcgaccgcaagctcgctggcctgcaagcggtgcag
acccttgcccggctgaatcgtacctgcccggggaagaagcgtacctttgttctcgatttc
cagaacacgatggaggagatccgtgacgcctttgcgccgtactttgaggccacagagctg
gaagagcggaccgacctcaatcagatctacgatctcgaaagccggatttcggcctccccg
tacaccattcgcagagacgtggagcgttttgccgatacgttcttcaggggcaacctcagt
ggccaagaccgggttcgcctggaaggcttggtgaaggaggctgtgggacgttttgaggtc
gatgacgatgaggcacagcaggaggagttcaggcagctccttcgcagctacatacgcttc
tactcgttcgtagctcagatcgtggccttgggtgatccgtggcttgagaagctgtttgcc
tacgtctcatggctttcccgcttgctgccgtcccgggaagtccccgcagacatcgcagtc
acggaggatatgctgcagctatcggcattccgtgtgcagaaaggggctgaagggtctgcc
tccttgcaagcggacgataccaaaaagctgtccgcgatcacggaatttggcgctaaccgg
tacacggaagaggaagagcggtcgctgtccgagatcatcgactccttcaacgagcggcac
gggaccaacttctcgcgggacgacttcctccggttcgaacgcgtaaatcgcgagatcatg
gacgatgagatgacggatatgatgaggaacaacccggcggatgtcgtctacgggacattc
gaacgtgccttcttccaaggaatggttcggatgttccagaaggacaacgagatgcgcagc
gccgtaatgaccgacaaggacgcgcgtgaccaagccacacggcacttcttcaacagagcg
atgcgaatggctaccgagagccgggtttga

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