Limimaricola variabilis: T8T21_05875
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Entry
T8T21_05875 CDS
T09625
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvr03000
]
T8T21_05875
Transcription factors [BR:
lvr03000
]
Prokaryotic type
Helix-turn-helix
XRE family
T8T21_05875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ScfRs
HTH_3
HTH_31
HTH_26
HTH_19
HTH_25
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
WPY95647
LinkDB
All DBs
Position
complement(1189326..1190648)
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AA seq
440 aa
AA seq
DB search
MGLERRGARLAGARIRARRLDLGLAQTALAQEVGISASYLNLIEHDRRRIGGRLLNAIAR
VLDLDPAQIAQGADGALVGRLEAAAAQHDAPLADAEVLAGRFPGWAGLIAAQAARIETLE
AQVAGLSDRLAHDPELSASLHQVITAATAIRSTASILTGGEALDRDWQARFHRNIHAESL
RLAESSRRLAGFLEAPGTSDAALTPLDRVERFLDRMGHHVAALEGPNPALSPEEVAMGAP
DLDPAAREVLRRWLVTYRADAQALPLDQLAQAWREAADPLGVAARLGCDLPRLLRRLATL
PPGAGPAQVGFVACDAGGALSPRRALDGLTLSRGAAACPLWPLYEALSQPGRPLRVRAVM
PGESGAVVLCHAVGWIETGPDWAGPARPRAAMLMLREEGGAESSGAVPRREVGPGCRLCP
RDACPARREPPLVPVRSDAL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggggcttgagaggcgcggtgcgcggctcgccggggcgcggatccgggcgcggcggctc
gatcttggactggcgcagaccgcgctggcgcaggaggtcgggatctcggcctcctacctc
aacctgatcgaacatgaccggcgccggatcgggggccggttgctcaacgccatcgcccgc
gtgcttgatctcgatccggcgcagattgcccaaggcgccgatggcgcgctggtaggtcgc
ctcgaggcggcggcggcgcagcacgacgcgcccctggccgatgccgaggtgctggccggg
cggtttcccggctgggccgggctgatcgcggcgcaggccgcgcggatcgaaacgctggaa
gcgcaggtcgcggggctgagcgaccggctggcgcatgaccccgagctgtcggcctcgctg
caccaggtgatcaccgccgccaccgcgatccgttcaaccgcctccatcctcactggcggc
gaggcgctcgaccgcgactggcaggcccggttccaccgcaatatccacgccgagagcctg
cggctggccgagagcagccgcagactcgccggttttctcgaggcccccggcaccagcgac
gcggcgctgaccccgctcgaccgggtcgagcggttcctcgaccgcatgggccaccacgtc
gccgcgctcgaaggccctaacccggcgctgtcgccggaggaggtcgcgatgggcgcgccc
gacctcgacccggcagcgcgcgaggtgctgcgccgctggctggtgacctaccgcgccgat
gcacaagcattgccgctcgatcagttggcgcaggcctggcgcgaagctgcggatccgctg
ggggtcgcggcgcgactcggctgtgatttgccgcggctgctgcgtcggctggcgactctg
ccgccgggggccgggccggcgcaggtcggcttcgtggcctgcgacgcaggcggcgcgctg
agcccgcgccgggcgctcgacggtttgaccctgtcgcgcggcgcggccgcctgtccgctc
tggccgctctacgaggcgctgtcgcagccgggccgcccgctgcgggtgcgcgccgtgatg
ccgggcgagagcggcgcggtggtgctgtgccacgccgtcggctggatcgagacggggccg
gattgggccgggcctgcgcggccgcgcgcagcgatgctgatgctgcgcgaggagggcggg
gcagagagctccggcgccgtgccgaggcgcgaggtcggtcccggctgccggctctgcccg
cgtgacgcttgcccggcgcggcgcgagccaccgttggtgccggtacggtccgatgcgctt
tga
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