Limimaricola variabilis: T8T21_05880
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Entry
T8T21_05880 CDS
T09625
Name
(GenBank) substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_05880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_05880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_05880
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
T8T21_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WPY95648
LinkDB
All DBs
Position
1190886..1192229
Genome browser
AA seq
447 aa
AA seq
DB search
MTRQTFSRRGLLKTGAMGGAGLALPTIFTSQARAFTNAPTGSTVTLGFNVPLTGAYADEG
ADELRALELAVEHLNGGGDGGMLQTFSSQALDGTGILGKKVEYVTGDDQTKSDVARATAQ
SMIQKDGAVMITGGSSSGTAIAVQGLCQEAGVIFMAGLTHSNDTTGKDRKANGFRHFFNA
YMSAQALAPVLQNLYGTDRRAYHLTADYTWGWTQEESIAAATEAMGWETTEKVRTPLGAG
DFSSYIAPVLNSGADILVLNHYGGDMVNSLTQAVQFGLRDRQANGKDFQIVVPLYSELMA
RGAGQAIKGIPGSQNWDWKLEDAGTQAFVKSFGEKYGFPPSQAAHTCYVQTLLYADAVAR
AGDFNPCAVVEALEGYEFDGLGNGPTLYRADDHQCFKDVVVVKGAENPQDEFHLVEIVEV
TPTEQVTYAADHPMFAGGALGECNPGA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacacgacagaccttctcgcgccgcggcttgctcaagaccggcgcgatgggcggtgcg
gggctcgcgctgcccacgatcttcacgtcacaggcgcgcgccttcaccaacgcgcccacc
ggctcgaccgtgacgctcggcttcaacgtgccgctgaccggcgcctatgccgacgagggc
gcggatgagctgcgggcgctcgaactcgccgtcgagcatctcaatggcggcggcgatggc
ggcatgctgcagaccttctcgagccaggcgctcgacggcaccggcatcctcggcaagaag
gtcgaatacgtcaccggcgacgaccagaccaaatccgacgtcgcccgcgccaccgcccag
tcgatgatccagaaggacggcgcggtgatgatcaccggtggctcgtcctcgggtacggcg
atcgcggttcagggcctgtgccaggaagccggcgtcatcttcatggccggtctcacccac
tccaacgacaccaccggcaaggaccgcaaggccaacggcttccgccacttcttcaacgcc
tacatgtcggcgcaggcgctggcaccggtgctgcagaacctctacggcaccgaccggcgc
gcctatcacctgaccgccgattacacttggggctggacccaggaggaatcgatcgcggcg
gcgaccgaggcgatgggctgggagaccaccgagaaggtacgcacgccgctcggcgcgggc
gatttctcgtcctacatcgcgccggtgctgaattccggcgccgacatcctcgtgctcaac
cattacggcggggacatggtgaactcgctcacccaggcggtgcagttcggtctgcgtgac
cggcaggccaacggcaaggacttccagatcgtcgtgccgctctactccgagctgatggcg
cgcggcgcgggccaggcgatcaagggcattcccggctcgcagaactgggactggaaactc
gaggacgccggcacccaggccttcgtgaagagcttcggcgagaagtacggcttcccgccc
tcgcaggccgcgcatacctgctacgtgcagacgctgctctatgcggacgcggtggcgcgg
gccggcgacttcaacccctgcgcggtggtcgaagcgctggagggctacgagttcgacggg
ctcggcaacggcccgacgctctaccgcgccgacgaccaccagtgcttcaaggacgtggtc
gtggtgaagggcgccgagaacccgcaggacgagttccatctcgtggagatcgtcgaggtc
acgccgaccgagcaggtcacctacgcggccgaccacccgatgttcgccggcggcgcgctg
ggcgagtgcaacccgggcgcctga
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