Limimaricola variabilis: T8T21_06030
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Entry
T8T21_06030 CDS
T09625
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00500
Starch and sucrose metabolism
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
Module
lvr_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
T8T21_06030 (glgX)
Enzymes [BR:
lvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
T8T21_06030 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
RcnB
DUF3459
Motif
Other DBs
NCBI-ProteinID:
WPY95677
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All DBs
Position
1221440..1223551
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AA seq
703 aa
AA seq
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MNRKNRISAGRPHPLGATYDGEGVNFAVFSQNATRMQLCLFERHGRETARIDLPEREGHV
WHGYIPGLKPGQHYGFRAHGPYRPDEGHRFNPNKLLLDPYGKQISGHPIWHDALHGYDTR
SKLQDLSYDTRDSAPYMTRSVVCDTSKLLPARHPDRPMADTVIYEAHVAGLTADRPDIAS
RGRFQGLASDRIIDHLGRLGITAIELLPVHAFVNDRFLVEKGLSNYWGYQSIGFFAPEPR
YLASHDIAEFRAMVDRFHSAGIEVLLDVVYNHTGEGNQLGPTLCFRGLDNASYYRLAENR
RYHIDDTGTGNTLNIEHPMVLRMVMDSLRYWVEVMGVDGFRFDLCTTLGRRRDGFDRNAP
FFQALRQDPVLGRVKLIAEPWDIGPGGYQLGAYPPPFSEWNDKFRDEVRDFWRGSPDMIG
KLASRLSGSAQQFDHDNRPATASINFLTAHDGFTLMDLVSYNEKHNEANGEDNRDGHSAN
HSDNMGVEGPTDDVSINAARARRRRNMLATLMISQGTPMLLAGDELGNSQQGNNNAYCQN
NEIGWVNWSGNDPDFLAFVRKLVAFRRAHPILRQKRFLHARSRKIDNRTDLFWRRADGRP
MTDADWQDPERRLLACEMRTASGTPDYAALEYALFIVINNGGPCPVALPAPPEGYQWVRH
IDSARPMADPRPHGLRTRIRGRSVVVMVLEPAETAQTPASRGD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaccggatcagcgccggccggccccacccgctcggcgcaacctatgac
ggcgaaggggtcaacttcgccgtcttctcgcaaaacgccacgcgaatgcagctctgcctg
ttcgagcgtcacggccgcgagaccgcgcggatcgatctgcccgaacgcgaagggcatgtc
tggcacggctacatccccggactgaaacccggccagcattacggcttccgcgcccatggc
ccctaccgccccgacgagggccaccgcttcaaccccaacaagctgctgctcgacccgtat
ggcaagcagatcagcggccatccgatctggcacgacgcgctgcatggctacgacacccgc
tcgaagctgcaagatctgagctacgacacccgcgacagcgcgccctacatgacccgctcg
gtggtctgcgacacctccaagctgttgcccgcgcgccatcccgaccggcccatggccgat
acggtgatctacgaggcgcatgtcgcaggcctcaccgcagaccggcccgacatcgccagc
cgaggccgtttccaggggctggcctcggaccggatcatcgaccatctcggacgcctcggc
atcaccgcgatcgagcttctcccggtgcatgccttcgtcaatgaccgcttccttgtcgaa
aagggcctttcgaactactggggataccagtcgatcggcttcttcgcccccgagccgcgc
tacctcgcctcccacgatatcgccgaattccgcgccatggtcgaccggttccactccgcc
gggatcgaggtactgctcgacgtggtctacaaccacaccggcgagggcaaccagctcggc
ccgacactgtgcttccgcggcctcgacaacgccagctactaccggctggcggagaaccga
cgctaccacatcgatgacaccggcaccggcaacaccctcaatatcgagcatccaatggtg
ctgcgcatggtgatggacagcctgcgctactgggtcgaggtgatgggcgtggacggcttc
cgcttcgacctgtgcacgacgctgggccgtcggcgcgatggcttcgaccgcaacgccccg
ttcttccaggcactgcgccaggacccggtgctgggccgggtcaagctgatcgcggagcct
tgggacattgggccaggcggctaccagctcggcgcctacccgccgcctttctcggagtgg
aacgacaagttccgcgacgaggtgcgggatttctggcgcggcagccccgacatgatcggc
aagctggccagccggctttcgggatcggcccagcaattcgaccacgacaaccggcctgcc
accgcctcgatcaacttcctgaccgcgcatgacggcttcacgctgatggacctggtgtcc
tacaacgagaagcacaacgaggccaatggcgaggacaaccgcgacggccattccgccaac
cacagcgacaacatgggcgtcgagggaccgaccgacgacgtgtcgatcaacgccgcccgc
gcccggcggcgtcgcaacatgctggcgacgctgatgatcagccagggcacgccgatgctg
cttgccggcgacgagttgggcaacagccagcagggcaacaacaacgcatattgccagaac
aacgaaatcggctgggtcaactggtcgggcaacgacccggacttcctcgccttcgtgcgc
aagctggtggcgttccgacgcgcccacccgatcctgcggcagaagcgtttcctgcacgcc
cgcagccgcaagatcgacaaccgcaccgatctgttctggcgccgcgccgacggccgaccg
atgaccgacgccgactggcaggaccccgagcggcgactgctggcctgcgagatgcgcacc
gcgtcgggaacgccagactacgcggcgttggaatacgcgctgttcatcgtcatcaacaat
ggcggcccctgcccggtcgccttgcccgccccgcccgagggctatcaatgggtgcgccat
atcgacagcgcccggcccatggccgatccgcgcccgcacgggctgcgcacccgcatccgc
ggccgatccgtggtggtgatggtgctcgaacccgcagagaccgcccagacacccgcaagc
cgaggagactga
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