KEGG   Limimaricola variabilis: T8T21_06660
Entry
T8T21_06660       CDS       T09625                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lvr  Limimaricola variabilis
Pathway
lvr00470  D-Amino acid metabolism
lvr00550  Peptidoglycan biosynthesis
lvr01100  Metabolic pathways
lvr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    T8T21_06660
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    T8T21_06660
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    T8T21_06660
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lvr01011]
    T8T21_06660
Enzymes [BR:lvr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     T8T21_06660
Peptidoglycan biosynthesis and degradation proteins [BR:lvr01011]
 Precursor biosynthesis
  Amino acid ligase
   T8T21_06660
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATPgrasp_ST
Other DBs
NCBI-ProteinID: WPY95794
LinkDB
Position
complement(1354680..1355594)
AA seq 304 aa
MSSGTHPKVVVLMGGPSAEREVSLSSGRECATALRQAGYEVIEVDAGPDLPAQLRKHAPD
VVFNALHGRRGEDGCVQGLLEWLGVPYTHSGVLASALAMDKEATKAAFRAEGLPVAESRL
ATKAEVMAAHVMPPPYVVKPYNEGSSVGVYIVPEGANQPPTLSDDMPEIVMVEAFLPGRE
LTTTVMGERALTVTDIVTSGWYDYDAKYKTGGSRHVVPAEIPTVIFEACLDYALRAHRAL
GCRGLTRTDFRWDETKGLDGLVLLETNTQPGMTPTSLAPEQAAKVGISFPDLCRWLVEDA
SCDR
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcgagcgggacacatcccaaggtcgtcgtattgatgggcggaccctcggccgagcgc
gaggtatcgctgtcgagcgggcgcgaatgcgcgacggccttgcggcaggcgggttacgag
gtgatcgaggtcgatgccggccccgacctgcccgcgcaactgcgcaagcacgcccccgac
gtcgtcttcaacgcactgcatggccgccgcggcgaggatggctgcgttcagggcctgctg
gaatggttgggcgttccctatacccattccggcgtgctggcctcggcgctggccatggac
aaggaagcgaccaaggccgccttccgcgccgaggggctgccggtcgccgagagccgtctg
gccaccaaggccgaggtcatggccgcgcatgtcatgccgccgccctatgtggtgaagccc
tataacgagggctccagcgtcggggtctatatcgtgcccgagggcgcgaaccagccgccg
acgctctccgacgacatgcccgagatcgtgatggtcgaggccttcctgccgggacgcgag
ctgaccaccaccgtgatgggtgagcgcgcgctgaccgtgaccgacatcgtgacgagcggc
tggtacgactacgacgccaagtacaagaccggcggctcgcgccacgtcgtgccggccgaa
atccccaccgtgatcttcgaagcctgcctcgactacgcgttgcgggcgcatcgcgcgctg
ggctgccgtgggctcacgcggaccgatttccgctgggacgagaccaaggggctcgacggg
ctggtgctgctcgagaccaacacccagcccggcatgaccccgacctcgctcgcgcccgag
caggcggcgaaggtcgggatcagcttcccggatctgtgccgctggctggtggaggacgct
tcgtgcgatcgctga

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