Limimaricola variabilis: T8T21_06695
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Entry
T8T21_06695 CDS
T09625
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00470
D-Amino acid metabolism
lvr00550
Peptidoglycan biosynthesis
lvr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T8T21_06695 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T8T21_06695 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
T8T21_06695 (murD)
Enzymes [BR:
lvr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
T8T21_06695 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
Precursor biosynthesis
Amino acid ligase
T8T21_06695 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
KARI_N
TrkA_N
MurD-like_N
AdoHcyase_NAD
F420_oxidored
ApbA
Motif
Other DBs
NCBI-ProteinID:
WPY95801
LinkDB
All DBs
Position
complement(1361936..1363333)
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AA seq
465 aa
AA seq
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MIPVRGMDGQTVAVLGLGRSGRATAAALRAGGAQVVAWDDGPSGREAAEAEGIELRDLTR
ASAYEGVSLLVTSPGIPHLYPAPHAAIAAAWEAGVPVDNDIGLFFRSYATEDFDQFDTMP
RIVAVTGSNGKSTTSALIHHILTENGRPAQLAGNIGRGVLDLDPPHDGEVVVLELSSYQT
ELARALTPDIAVLTNLSPDHLDRHAGPGGYFAAKRRLFSEGGPDRAVVGVDENEGRYLAN
QLATGQADDRVIAISSGRKLTGPGWNVFARKGFLAEYRKGRQVASVDLRDIPGLPGAHNH
QNACAAWAVARALGLGPRGIEAALRSYGGLPHRSQRVGEKDGVIFVNDSKATNVDAAAKA
LAAFPRIRWICGGLEKEGGLGGLGTGLANVAKAYVIGREAEAFAVKLPGVEAEVCGTMAV
AVERAMAEAEPGDTVLLAPAAASFDQYDNFEKRGEDFVAQVRARL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggttcgtggaatggacggccagaccgtcgcggtgcttggccttggccggtcg
ggccgggccacggcggcggcgctgcgcgcgggtggcgcgcaggtcgtcgcttgggatgac
ggtccctcaggccgcgaggccgccgaggccgaggggatcgagctgcgcgacctgacccgt
gcctcggcctatgaaggcgtgtcgctgctcgtcacctcgccgggcatcccgcatctctac
cccgcgccgcacgcggccatcgccgccgcttgggaggcaggcgtgccggtcgacaacgat
atcggcctcttcttccgcagctacgcgaccgaggatttcgaccagttcgataccatgccg
cgcatcgtcgcggtcaccggctcgaacggcaagtcgaccacctccgcgctgatccatcac
atcctgaccgagaacgggcggcccgcgcagcttgccggcaatatcgggcgcggtgtgctc
gacctcgacccgccgcatgacggcgaggtggtggtgctggagctgtcgagctaccagacc
gagctcgcgcgcgcgctgaccccggacatcgcggtgctgacgaacctgtcgcccgatcat
ctcgaccgccacgcggggccgggcggctatttcgccgcgaagcgccggctcttttccgag
ggcggcccggatcgcgccgtggtcggagtggacgagaacgaggggcgctacctcgccaac
caactcgctaccgggcaggccgacgaccgcgtcatcgcgatctcctcgggccgcaagctc
accgggccgggctggaacgtcttcgcccgcaagggtttcctcgcggagtatcgcaagggg
cggcaggtcgcctccgtcgatctgcgcgacatccccggactgccgggcgcgcataaccac
cagaacgcctgcgcggcttgggcggtggcgcgggcgctcgggctggggccgcgcggcatc
gaggcggcgctgcgctcctatggtggcctgccgcaccgctcgcagcgcgtgggcgagaag
gacggcgtgattttcgtcaacgacagcaaggccacgaatgtcgacgcggctgccaaggcg
ctggccgcctttccgcggatccgctggatctgtggcgggctggagaaggaaggcggcctc
ggcggcttgggcacggggctcgcgaatgtggcgaaggcctacgtgatcggccgcgaggcc
gaggcgttcgccgtgaagcttccgggcgtcgaggcggaggtctgcggcaccatggccgtc
gcagtcgagcgcgccatggccgaggcggagccgggtgacacggtcctgctggcgccggcc
gcggcgagcttcgaccagtacgacaatttcgagaagcgcggcgaggatttcgtcgcgcag
gtgcgcgcgcggctctga
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