Limimaricola variabilis: T8T21_06725
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Entry
T8T21_06725 CDS
T09625
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_06725 (rsmH)
Enzymes [BR:
lvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
T8T21_06725 (rsmH)
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
T8T21_06725 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WPY95807
LinkDB
All DBs
Position
complement(1369535..1370509)
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AA seq
324 aa
AA seq
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MTDAPHIPVLLRPLIAALAPIEGVWLDGTFGAGGYTRALLDAGADKVFAVDRDPSTFEMA
QAWAGKYGDRLQMREGRFSQLDALAGEPLDGVVLDLGVSSMQIDQAERGFSFQKDGPLDM
RMGRDGPSAADLVNEADEAHLARILFLYGEERQSRRIARAIIAARPVTTTLQLAEIVKSC
LPRQKPGQSHPATRSFQALRIAVNEEYDELFEGLAAAERALKPGGLLGVVTFHSVEDRMV
KRFMQLRSGATGNANRFAPEVEGPPPAFELVGRKAVAADDDELAVNPRARSARLRIARRT
DAPAGRAEPAALGMPVLDKGEKRR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgccgcatatcccggtcctgctgcgtccgctgatcgccgcgctggcgccg
atcgagggcgtctggctggacggcacctttggggccggtggctatacccgggcgctcctg
gacgcgggggccgacaaggtcttcgcggtggaccgcgatccctcgaccttcgaaatggcc
caagcctgggccgggaagtatggcgaccggctgcagatgcgcgaggggcggttctcgcag
ctcgacgcgctggcgggcgagccgctcgacggcgtcgtgctcgatctgggcgtgtcctcg
atgcagatcgatcaggccgagcgggggttctccttccagaaagacggcccgctcgacatg
cgcatggggcgcgacggcccctccgccgccgatctggtcaacgaggccgacgaggcgcat
ctggctcgcatcctgttcctctatggcgaggagcggcagagccgccgcatcgctcgcgcg
atcatcgcggcgcgccctgtcacgacgacgctgcagctcgccgagatcgtgaaatcctgc
ctgccgcgtcagaagccgggtcagagccaccccgccacgcgcagcttccaggcgctcagg
attgcggtgaacgaagagtatgacgagctgttcgagggcctcgccgccgccgagcgcgcg
ctcaagcccggtggtctcctgggcgtggtgaccttccactcggtcgaggaccggatggtc
aagcgcttcatgcagctgcgatccggcgccaccggcaacgccaaccgcttcgccccggag
gtcgagggcccgccgccggccttcgagctggtggggcgcaaggcggtggccgccgatgat
gatgaactcgccgtcaatccgcgtgcccgctcggcgcggctcaggatcgcgcggcgcacc
gatgccccggcgggccgggccgaaccggccgcgctgggaatgcccgttctggacaagggg
gagaaacgccgatga
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