Limimaricola variabilis: T8T21_07365
Help
Entry
T8T21_07365 CDS
T09625
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_07365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_07365
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T8T21_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WPY96052
LinkDB
All DBs
Position
complement(1498799..1500355)
Genome browser
AA seq
518 aa
AA seq
DB search
MAALPGGEVTEGGPMLAADGRPLKHSLKRALRREKLRAFLLVSPLLIFILVAFVAPIADM
LFRSVENQIVSETLPRTVVALREDQNLPEAAPGEPVYEALYTDLFIAAEYKSHTRLGSRL
NYEMTGLSSLFRGTGRDVGRFDTDIYTDQFVEAEPALEDPVAWSNWMANDEIRAALPATA
DAWDAWVKLTVEAYEDDPLEEDVEDFVYTALYRDLSNGAAPAGFPDVDVSGFESVSIKAL
FEESDEDWVDPEIWQVIKTYSPAYTDGYFLNSVDMMNGPGGDAQWRPADEQIYLKLFWRT
MWMSLAITFSCILLGYPIAYLLSTLPLRSANVLMILVLLPFWTSLLVRTSAWKVLLQQQG
VINDTLVWLGIVSDANRLALINNATGTVIAMTHILLPFMILPLYSVMKTIPPSYMRAAKS
MGANDWTAFWRVWFPLSVPGIGAGSILAFILSIGYYITPEIVGGTEGVFISNRIAYHISS
SLNWGLAAALGTILLALVLTLYWVYDRIVGIDNVKLGG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcccgggcggcgaggtgaccgaaggaggcccgatgctggccgccgatggc
aggcctctcaagcacagcctgaaacgggcgctccggcgcgagaagctgcgcgccttcctc
ttggtctcgccgctgctgatcttcatcctcgtggccttcgtggccccgatcgcggacatg
ctgttccgctcggtcgagaaccagatcgtctccgagacgctgccccgcaccgtggtggcg
ttgcgcgaggaccagaacctgcccgaggccgctcccggcgagccggtctacgaggcgctc
tacaccgacctcttcatcgccgccgagtacaagtcgcacacgcgcctcggcagccgtctc
aactacgagatgaccggcctcagctcgctgttccgcggcaccggccgcgatgtcggccgc
ttcgacaccgatatctacaccgaccagttcgtcgaggctgagcccgcgcttgaggacccc
gtggcgtggtccaactggatggcgaacgacgagatccgcgcggcgctgcccgcgaccgcc
gacgcctgggatgcctgggtcaagctgaccgtcgaggcctatgaggacgacccgctcgag
gaggatgtcgaggacttcgtctataccgcgctctatcgcgatctttcgaacggcgccgcg
cctgccggcttccccgacgtcgacgtctccggcttcgaaagcgtctcgatcaaggcgctg
ttcgaggagtcggacgaggattgggtcgatcccgagatctggcaggtcatcaagacctac
agcccggcttataccgacggctatttcctgaactcggtcgacatgatgaacggccccggt
ggcgacgcccaatggcgccccgccgacgagcagatctatctcaagctgttctggcgcacg
atgtggatgtcgctggcgatcaccttctcctgcatcctgctgggatacccgatcgcctac
ttgctctcgacgctgccgctgcgctcggccaacgtgctgatgatcctcgtgctgctgccg
ttctggacgtcgctgctggtgcggacctcggcctggaaggtgctgctgcaacagcagggc
gtgatcaacgacacgctggtctggctcggcatcgtgtccgacgccaaccgtctcgcgctg
atcaacaacgccaccggcacggtgatcgcgatgacgcacatcctgctgcccttcatgatc
ctgccgctctattcggtgatgaagacgatcccgccgagctacatgcgcgctgccaagtcg
atgggcgcgaatgactggaccgcgttctggcgggtgtggttcccgctctcggtgccgggc
atcggcgcgggcagcatcctcgccttcatcctgtcgatcggctactacatcacgcccgag
atcgtcggcggcaccgagggtgtcttcatctcgaaccggatcgcctatcacatctcgtcg
tcgctgaactggggcctcgcggccgcgctgggcacgatcctgctggcgctcgtgctcacc
ctctactgggtctacgaccggatcgtcggcatcgacaacgtcaagctgggaggctga
DBGET
integrated database retrieval system
