KEGG   Limimaricola variabilis: T8T21_08720
Entry
T8T21_08720       CDS       T09625                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
lvr  Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lvr03021]
    T8T21_08720 (rpoH)
Transcription machinery [BR:lvr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     T8T21_08720 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11
Other DBs
NCBI-ProteinID: WPY93209
LinkDB
Position
complement(1755728..1756627)
AA seq 299 aa
MAETYSNLPAPSPEQGLNRYLQEIRKFPMLEPEEEYMLAKRWVDHEDASAAHRLVTSHLR
LAAKIAMGYRGYGLPQAEVISEANVGLMQAVKKFDPEKGFRLATYAMWWIRASIQEYVLR
SWSMVKLGTTSGQKKLFFNLRKAKARLGALEEGDLRPENVKQIATDLGVTEEEVVSMNRR
MSGGDASLNAMVGSDGDSATQWQDWLEDDSADQATDYEERDELDARRELMAEAMGVLNDR
ERDILVQRRLQDEAVTLEELSGQYEVSRERIRQIEVRAFEKLQKRMQELARERGMLEDA
NT seq 900 nt   +upstreamnt  +downstreamnt
atggcagagacctacagcaatctccccgccccgtcgccggagcagggactgaaccgatac
ctgcaggaaatccgcaagttcccgatgctggaaccggaagaagagtacatgctggccaag
cgctgggtggaccacgaggacgccagcgccgcgcacaggctcgtgacctcgcatctgcgg
ctcgccgccaagatcgccatgggctatcgcggctacgggctgccgcaggccgaggtgatc
tccgaggccaatgtcggtctgatgcaggcggtgaagaagttcgaccccgaaaagggtttc
cggctggccacctacgcaatgtggtggatccgcgcctcgatccaggaatacgtcctgcgg
tcctggtcgatggtcaagctcggcaccacttcgggccagaagaagctgttcttcaacctg
cgcaaggccaaggcccgtctcggcgcgctcgaagagggcgacctgcgccccgagaacgtc
aagcagatcgccaccgatctgggcgtgaccgaggaagaggtcgtgtcgatgaaccggcgc
atgtcgggcggcgacgcgtcgctcaacgccatggtcggctcggatggcgacagcgcgacg
cagtggcaggactggctcgaggatgacagcgccgaccaggccaccgactacgaggagcgc
gacgagctcgacgcccgtcgcgagctgatggccgaggcgatgggcgtcctcaacgaccgc
gagcgcgacatcctcgtacagcgccggctgcaggacgaggcggtgacgctcgaggaactg
tcggggcagtacgaggtgagccgcgagcggatccgccagatcgaggtgcgcgccttcgaa
aagcttcagaagcggatgcaggagctggcgcgcgagcgcggcatgctcgaagacgcctga

DBGET integrated database retrieval system