Limimaricola variabilis: T8T21_08725
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Entry
T8T21_08725 CDS
T09625
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_08725
Enzymes [BR:
lvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
T8T21_08725
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T8T21_08725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
CRLF3_C
Motif
Other DBs
NCBI-ProteinID:
WPY93210
LinkDB
All DBs
Position
complement(1756792..1757811)
Genome browser
AA seq
339 aa
AA seq
DB search
MADLSIIRFTIAEDPPARLDKALARDVPEEAALSRSRIAKLLAEGAVTVDGAVATDAKAA
VAAGAVVEIAVPQAAESHMEPEAIPLEVVWEDDDLIVIDKPAGMVVHPAPGSPDGTLVNA
LIHHCGDSLSGVGGAKRPGIVHRIDKDTSGLLVVAKTDRAHQGLAIQFEKHSAERHYFAL
CHGVPDPNDPRLRGVKGASFETGSVLKIQTLLGRHRTDRQRQAVSFEQGRHAVTRAKVIE
AFAGAALVECRLETGRTHQIRVHMAHAGHALIGDPVYGGRRKLSEKTHGARAVTLAANFG
RQALHAASLGFTHPATGEKLRFDSPMPPDMAELLSALRG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctctccatcatccgcttcaccatcgccgaagatccgccggcgcgtcttgat
aaggcgctcgcccgcgatgtgccagaggaggccgcgctgtcgcgctcgcgcatcgccaag
ctgctcgccgagggggcggtgacggtggatggggcagtggcgaccgatgcgaaagcggcc
gtggccgccggggcagtggtcgagatcgcggtgccgcaggcggccgaaagccacatggag
ccggaagcgatcccgctcgaggtcgtctgggaagacgatgacctgatcgtcatcgacaag
cctgctggaatggtcgtccatcccgcgcccggctcgcccgacggcacgctggtcaacgcg
ctgatccatcattgcggcgacagcctgtccggcgtcggcggtgcgaagcgtcccggcatc
gtccaccggatcgacaaggacacctcgggccttctggtggtcgccaagaccgaccgcgcc
catcagggtctggcgatccagttcgaaaaacacagcgccgagcggcactatttcgcgctg
tgccacggcgtcccggatccgaacgacccgcgcctgcgcggcgtgaagggggcgagcttc
gagaccgggtcggtgctgaagatccagacgctgctgggccggcaccggaccgaccggcag
cgccaggcggtgagcttcgagcagggccgccacgcggtgacgcgcgccaaggtgatcgag
gcctttgccggggcggcgctggtcgaatgccggctggaaaccgggcgcacccatcagatc
cgggtccacatggcgcatgccggccacgcgctgatcggcgatccggtctatggcgggcgg
cgcaaactgtcggaaaaaacccatggcgcccgtgccgttacgctggccgcgaattttggc
cggcaggcgttgcatgccgcgagcctcggtttcacccatcccgcaaccggcgaaaagctg
cgcttcgacagcccgatgccgccggacatggcggaactcctttccgcgcttcggggttga
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