Limimaricola variabilis: T8T21_09030
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Entry
T8T21_09030 CDS
T09625
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_09030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_09030
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
T8T21_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WPY93270
LinkDB
All DBs
Position
complement(1815970..1817493)
Genome browser
AA seq
507 aa
AA seq
DB search
MTDLKSRLLIAALAATTALTAAPALAEGTLTVAQRQDPANWDPVDTFLVAWGSVASNIYD
GLVRRDENLDLQPGLAESWEVLDEGMRIRFQLREGVQFHNGEPFNAEAVKYTFDRLLGEV
GGAGPQQSNYTTIDRVEVVDATTVDFHMAQPDPVILTKLSGYGAMIVPPQYIEENGQEHF
DMNPVGTGPFKFVSYEQGARIELEANAEYFEGAPELDGLVFRFIREDATRLAELQSGGVD
LVTDVAFSAVPTIEAADNAGIVAVAGPSIYSLALKTKDAVTEDVRVRRALNMAVDKQALI
DAFLAGRGSPIASLQGELSFGHDPELEGYPFDPQQAMALLEEAGVAPGTEMTIDYRAGNS
TFNEVAQALTGFFAAVGLNVGLNPVEDGVFLNEIVPQGRTNEMYQFSWGGWTFDFDNTAY
LTYHEGEKWNPYGTSEEMNALLDEQRQSPDQELREEILQKVAQLAHEEAYHIPLYNEETV
YAVADRVEGFVPAPDKRLRLTEVSVAE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacggatctgaaatcgcgcctgctgatcgcggcgctggccgccaccaccgcgcttacg
gccgcccccgcgctcgccgagggcacgctcaccgtggcgcagcgccaggatccggccaac
tgggacccggtcgacaccttccttgtcgcctggggctcggtcgcttcgaacatctatgac
ggcctcgtgcgccgcgacgagaacctcgatctgcagcccggcctcgccgaaagctgggaa
gtgctcgacgagggcatgcgcatccgcttccagctgcgtgagggcgtgcagttccacaac
ggcgagccgttcaatgccgaggcggtgaaatacaccttcgaccggcttctgggcgaggtc
ggcggcgccggtccgcagcagtcgaactacaccaccatcgaccgcgtcgaggtcgtcgac
gcgaccaccgtcgatttccacatggcccagcccgatccggtgattctgaccaagctgtcg
ggctacggcgcgatgatcgtaccgccgcaatacatcgaggaaaacggccaggagcatttc
gacatgaacccggtcggcaccggcccgttcaaattcgtcagctacgagcagggcgcgcgg
atcgagctggaggccaacgcggagtacttcgagggtgcgccggagctcgacgggctggtg
ttccgcttcatccgcgaggatgcgacgcgtctggccgagctgcagtcgggcggtgtcgac
ctcgtcaccgacgtcgccttctcggcggtgccgaccatcgaggccgctgacaatgccggg
atcgtcgcggtggccgggccttccatctactcgctggcgttgaagaccaaggacgccgtg
accgaggacgtgcgggtgcgccgcgcgctcaacatggccgtcgacaagcaggcgctgatc
gacgccttcctcgccgggcgcggcagcccgatcgccagcctgcagggcgagctgtccttc
ggccatgatcccgagcttgagggctatcccttcgacccgcagcaggcgatggcgctgctc
gaggaggccggcgtcgcgccgggcaccgagatgaccatcgactaccgcgccggcaactcg
accttcaacgaggtggcacaggcgctgaccggcttcttcgccgcggtggggctgaatgtc
ggtctgaacccggtcgaggatggcgtcttcctcaacgagatcgtgccgcagggccggacc
aacgagatgtaccagttcagctggggcggctggaccttcgacttcgacaacaccgcctat
ctgacctaccacgaaggcgagaagtggaacccctacggcacctccgaggagatgaacgcg
cttctcgacgagcagcggcagtcgcccgatcaggagctgcgcgaggagatcctgcagaag
gtcgcccagctcgcgcatgaagaggcctaccacattccgctctacaacgaggagacggtc
tacgcggtggccgaccgggtcgagggcttcgtgcccgcccccgacaagcggctgcgcctc
accgaggtgagcgtcgccgagtaa
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