Limimaricola variabilis: T8T21_09280
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Entry
T8T21_09280 CDS
T09625
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_09280 (rsmI)
Enzymes [BR:
lvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
T8T21_09280 (rsmI)
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
T8T21_09280 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
WPY93319
LinkDB
All DBs
Position
complement(1868416..1869303)
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AA seq
295 aa
AA seq
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MTNFETRPVPPGLHFVATPIGTARDITLRALDLLAGADALAAEDTRTLRKLMEIHGVPLN
GRPLLAYHDHSGAGDRARILAVLERGGSVAYVSEAGTPLVADPGYALGRAAIAAGHKVLA
APGASAVLAALAVSGLPTDRFAFAGFLPPAKTQRETEIAALRALPFTLVLYESPKRVHEL
LASLRDILGSDRQVALCRELTKRFEEVIRGTAAEVCAEIEGRTLKGEVVVLVGRAETEEV
TGSDLETALREAMRSMRIKDAATAVAGALGLPRREVYQAALNLAKEPDDADGDGA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaatttcgaaacgagaccggttccgccggggctgcacttcgtggcgacgccgatc
ggaacggcgcgggacatcacgctaagggcgctcgacctgctggccggggccgatgcgctc
gccgccgaggacacgcggaccttgcgcaaattgatggagattcacggtgtgccgctgaac
ggtcggccgctgctggcctatcacgaccattcgggggcgggggaccgggcgcggatcctc
gcggtgctcgagcgcggcggctcggtggcctatgtttccgaggccggcacgcccctggtc
gccgatccgggctatgcgctgggtcgcgccgcgatcgccgccgggcacaaggttctcgcc
gcgccgggcgcctcggcggtgctggcggcgctggcagtgtctgggctgccgaccgaccgc
ttcgccttcgccggttttctgccgccggccaagacccagcgggagaccgagatcgccgcg
ctcagggcgctgcccttcacgctggtgctctatgagagccccaagcgcgttcacgaatta
ttagcttccttgcgcgatattctcgggagtgaccggcaggtggcgctgtgccgcgaactg
actaagcggttcgaggaggtcatccgcgggacggcggcggaggtctgcgccgagatcgag
ggacgtacgctcaagggagaggtcgtcgtgctggtcggccgggccgaaaccgaggaggtg
accggtagcgacctcgagaccgcgttgcgcgaggcgatgcgcagcatgcggatcaaggat
gcggcgacggcggtggccggggcgctcggcctgccacgccgggaggtctatcaggcggcg
ctgaacctggcgaaggagccggatgatgcagatggagatggggcttga
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