KEGG   Limimaricola variabilis: T8T21_09500
Entry
T8T21_09500       CDS       T09625                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lvr  Limimaricola variabilis
Pathway
lvr00010  Glycolysis / Gluconeogenesis
lvr00020  Citrate cycle (TCA cycle)
lvr00260  Glycine, serine and threonine metabolism
lvr00280  Valine, leucine and isoleucine degradation
lvr00310  Lysine degradation
lvr00380  Tryptophan metabolism
lvr00620  Pyruvate metabolism
lvr00630  Glyoxylate and dicarboxylate metabolism
lvr00640  Propanoate metabolism
lvr00670  One carbon pool by folate
lvr00785  Lipoic acid metabolism
lvr01100  Metabolic pathways
lvr01110  Biosynthesis of secondary metabolites
lvr01120  Microbial metabolism in diverse environments
lvr01200  Carbon metabolism
lvr01210  2-Oxocarboxylic acid metabolism
lvr01240  Biosynthesis of cofactors
Module
lvr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lvr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lvr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lvr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    T8T21_09500 (lpdA)
   00020 Citrate cycle (TCA cycle)
    T8T21_09500 (lpdA)
   00620 Pyruvate metabolism
    T8T21_09500 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    T8T21_09500 (lpdA)
   00640 Propanoate metabolism
    T8T21_09500 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    T8T21_09500 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    T8T21_09500 (lpdA)
   00310 Lysine degradation
    T8T21_09500 (lpdA)
   00380 Tryptophan metabolism
    T8T21_09500 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    T8T21_09500 (lpdA)
   00670 One carbon pool by folate
    T8T21_09500 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lvr04147]
    T8T21_09500 (lpdA)
Enzymes [BR:lvr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     T8T21_09500 (lpdA)
Exosome [BR:lvr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   T8T21_09500 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 NAD_binding_8 GIDA HI0933_like FAD_binding_2 DAO Thi4 Lys_Orn_oxgnase AlaDh_PNT_C FAD_binding_3 3HCDH_N UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: WPY93360
LinkDB
Position
1912123..1913511
AA seq 462 aa
MASYDLIVIGAGPGGYVCAIKAAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHATHAL
HEAEHNFAKMGLKTEKPEVDWDQMLAYKRDSVGQNTGGIEFLFKKNKIDWLKGWGSIPEK
GKVKVGDDVHEAKHIVIASGSVPASIPNVEIDEKVVVTSTGALELGRIPEKMVVIGAGVI
GLELGSVYRRLGTEVTVVEYLDAITPGMDAEIARNFQKILTKQGLKFVLGSAVQGVTVEG
DKATVTWKSRKDDSEQSLEADCVLVATGRKPYVDGLGLEELGVEMTDRGQIKIDDHFKTS
VDGVYAIGDAVPGLMLAHKAEDEGVAIAEILAGQKGHVNYEVIPGVVYTHPEVATVGKTE
EQLKEEGRAYKVGKFPFMGNARAKANFSAEGFVKILADKETDRILGAHIIGPMAGDLIHE
VCVAMEFGAAAEDLARTCHAHPTYSEGVREAALALGDGAIHA
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcatcctacgatctcatcgtcatcggcgccggccccggcggctatgtctgcgccatc
aaggcggcccagctcggcctcaagaccgcggtggtcgaagggcgcgagacgctgggcggc
acctgcctcaacgtgggctgtatcccctccaaggcgctgctgcacgccacccatgcgctg
cacgaggccgagcacaacttcgccaagatgggcctgaaaaccgaaaagcccgaagtcgat
tgggaccagatgctcgcctacaagcgcgacagtgtcggccagaacaccggcggcatcgaa
ttcctgttcaagaagaacaagatcgactggctcaagggctggggctcgatccccgagaag
ggcaaggtcaaggtcggtgacgacgtccacgaggccaagcacatcgtgatcgcgtccggc
tccgtccccgcctcgatccccaatgtcgagatcgacgagaaggtcgtcgtgacctcgacc
ggcgcgctggagctgggccgcatccccgagaagatggttgtgatcggcgcgggcgtcatc
gggctggagttgggctcggtctaccgccgcctcggcaccgaggtcaccgtggtcgagtat
ctcgacgcgatcacccctggcatggacgccgagatcgcccgcaacttccagaagatcctg
accaagcaggggctgaaattcgtgctcggctcggcggtgcagggcgtgacggtcgagggc
gacaaggccaccgtcacctggaagagccgcaaggatgacagcgagcagagcctcgaggcg
gattgcgtgctcgtggcgaccggccggaagccctatgtcgacgggctgggtctcgaagag
cttggcgtcgagatgaccgatcgcggccagatcaagatcgacgatcacttcaagaccagc
gtcgacggcgtctacgcgatcggtgacgcggtgccgggcctgatgctcgcgcacaaggcc
gaggacgagggcgtggcgatcgccgagatcctcgccggtcagaagggccacgtgaactac
gaggtgatcccgggcgtggtctacacccatcccgaggtggcgaccgtcggcaagaccgag
gagcagctcaaggaagagggccgcgcctacaaggtcggcaagttcccgttcatgggcaac
gcgcgggccaaggccaacttctcggccgagggcttcgtgaagatcctggccgacaaggaa
accgaccggatcctcggcgcgcacatcatcggcccgatggccggcgacctgatccacgag
gtctgcgtggcgatggagttcggcgcggcggccgaggatctcgcccgcacctgccatgcc
cacccgacctatagcgagggcgtgcgcgaggcggctctggcgctgggcgacggcgcgatc
cacgcctga

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