Limimaricola variabilis: T8T21_09540
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Entry
T8T21_09540 CDS
T09625
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvr03000
]
T8T21_09540
Transcription factors [BR:
lvr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
T8T21_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_IclR
HTH_23
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WPY93367
LinkDB
All DBs
Position
complement(1918603..1919658)
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AA seq
351 aa
AA seq
DB search
MATLKDISTELGLSVATVSRALNGFPEVGAKTRARVQEAAARLGYRPNRSAQRLATGRSG
VVGMIVKLRADMSADQTFFDVLTTLTAELAACDLDLVLSVDQGSDPTAPYARMLERDLLD
GFVLNAPVPDDPRPSFLRSRGVPFVMHGQAHDAPDYAFFGIDNRAVSADAVALLSDLGHA
RIALVNGEARFAFAGDREAGFRAAMAGAGLAVPDGFVQGGAPTESTGYTMALAWLAGRAG
PRPTAILCATTAMAQGVLRAARDLRLSVPGDLSVIAHDDALPGIGPAHFTPPLTVTHAPM
RDACAPLARMLIDHLNGADPARLQTVIRAGLIVRASTGPVPKGEERPWQTP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcaaggatatctccaccgagctcggcctctcggtcgcgacggtcagccgg
gcgctcaacgggtttcccgaggtgggcgccaagacccgtgcccgggtgcaggaggcggcg
gcgcggctgggctaccggcccaaccgctcggcgcagcggctggcgaccggccgctccggc
gtggtcggcatgatcgtcaagctgcgcgccgacatgtcggccgaccagaccttcttcgac
gtgctgacgacgctcacagccgaattggccgcatgcgacctcgatctcgtgctctcggtc
gatcagggcagcgacccgaccgcgccctatgcgcggatgctcgagcgtgacctgctcgat
ggcttcgtgctcaacgcgccggtgccggatgatccgcgccccagcttcctgcgctcgcgc
ggcgtgcccttcgtgatgcatggccaggcccatgacgcgccggactacgccttcttcggc
atcgacaatcgcgcggtcagcgccgacgcggtcgcgctgctgtccgatctgggtcatgcc
cggatcgctctggtcaatggcgaggcgcgcttcgccttcgccggagatcgcgaggccgga
tttcgggccgccatggcaggggcagggctggccgttccggatggtttcgtccagggcggg
gcgccgaccgaaagcaccggctacaccatggcgctggcctggctggcggggcgggccgga
ccgcgtccgacggcgatcctgtgcgccaccaccgcgatggcgcagggggtgctgcgcgcc
gcgcgcgatctgcgcctgtcggtgccgggcgacctgtcggtgatcgcgcatgacgacgcg
ctgcccgggatcggtccggcgcatttcacgccgccgctcaccgtcacccatgcaccgatg
cgcgatgcctgcgcgccgctcgcccggatgctgatcgaccacctcaacggcgccgatccg
gcgcgactgcaaaccgtgatccgggccgggctgatcgtccgcgcctcgaccgggcccgtc
ccgaagggagaggagagaccatggcagaccccgtga
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