KEGG   Limimaricola variabilis: T8T21_09990
Entry
T8T21_09990       CDS       T09625                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
lvr  Limimaricola variabilis
Pathway
lvr00061  Fatty acid biosynthesis
lvr00071  Fatty acid degradation
lvr01100  Metabolic pathways
lvr01212  Fatty acid metabolism
lvr02024  Quorum sensing
lvr04146  Peroxisome
Module
lvr_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    T8T21_09990
   00071 Fatty acid degradation
    T8T21_09990
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    T8T21_09990
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T8T21_09990
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:lvr01004]
    T8T21_09990
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lvr04147]
    T8T21_09990
Enzymes [BR:lvr01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     T8T21_09990
Lipid biosynthesis proteins [BR:lvr01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   T8T21_09990
Exosome [BR:lvr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   T8T21_09990
  Exosomal proteins of breast cancer cells
   T8T21_09990
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: WPY93454
LinkDB
Position
2009563..2011521
AA seq 652 aa
MQHDPQPSRDPRILHPDWEPGDTLIALLARNARTHPDGIAMRERDHGIWQQTTWAGYLDA
VLALAAGFEAAGIGPGDIVLVTGDNRARLYVATLALTALRAIPAPAYSDARPEELLDQMI
REGIRAAVVEDQEQVDKLESLRDRHPDLTKIFYDDPRGLGAKAPAGAAALADLAENGQAR
LAAEAGLRDDLIGRATVFDTAVLLHSSGTTGAPKGIPLRHGHVLSGVRNAAAAGYFREGE
EHMAYLPMAWVGDFSFSIAAAIELRFTVNVPENQETALHDLREIAPTLYFASPRAWSAML
TRVQVGIAETSGLKRRLYDHFMPFALELERARLAGRKPSALQRFWRGVGDVVIYGPLRDQ
LGLRRVARPYTAGEAIGEEVFLYFRALGLNLRQFYGQTENCALAVAQSSDDISLTTVGRP
FPGVEVRIDETGEILLKGGNIFDGYFENEKATAESLRDGWLCTGDAGQWSDDGQLMVLGR
LSEVMHKADGTRFIPTYLENRLKFASAIRDVCVIGKDRAFLSAIVCIDFAAVGQWAQERG
LSYTSYAELSQRPEVLELVRREIARLNDAVPAELSIRRFVNLHKEFDPDDGEVTRTRKLK
RGVIDARYGQIIDAVYAGHDEIEYEARITYESGETGVLTRVLKIGDLDGGQH
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgcagcatgatccgcagccgtcccgcgacccgcgcatcctgcaccccgactgggagccg
ggcgacacgctgatcgcgcttctggcgcgcaacgcccggacgcatcccgacgggatcgcg
atgcgcgaacgcgaccacggcatctggcagcagaccacctgggccggatatctcgacgcc
gttctggcgctcgccgccggcttcgaggcggcaggcatcgggccgggcgacatcgtgctg
gtgaccggcgacaaccgtgcccggctctatgtcgcgacgctggcgctgaccgcgctgcgc
gcgatcccggcgcctgcctattccgatgcccggcccgaagagttgctggaccagatgata
cgcgagggcatccgcgccgcggtggtcgaggatcaggagcaggtcgacaagctcgaaagc
ctgcgcgaccggcatcccgacctgacgaagatcttctacgacgatccgcgcgggctcggt
gccaaggcgcctgcaggcgccgccgcgctggccgatctcgccgagaacggccaggcccgg
ctcgccgccgaggccgggctgcgcgacgatctgatcggccgcgccacggtgttcgacacc
gctgtcctgctgcattcctcgggcaccaccggcgcgcccaagggcatcccgctgcgccac
ggacacgtgctctcgggcgtgcgcaacgccgccgctgccggctatttccgcgagggcgag
gagcacatggcctacctgccgatggcttgggtgggcgatttcagcttttcgatcgccgcc
gcgatcgagttgcggttcaccgtcaacgtgcccgagaaccaggagaccgcgctgcacgac
ctgcgcgagatcgctccgacgctctacttcgcctcgccgcgcgcctggtcggcgatgctg
acgcgggtccaggtcggcatcgccgaaacctcggggctgaagcggcggctctatgaccac
ttcatgcccttcgcgctcgaactcgaacgcgcccggctggcgggccgcaagccatcggca
ctgcagcggttctggcgcggcgtcggcgacgtggtgatctacggcccgctgcgtgaccag
ctcggcctgcgccgtgtcgcgcggccctacaccgccggtgaggccatcggcgaggaggtg
ttcctctatttccgcgcgctcggcctcaacctgcgtcagttctacggccagaccgagaac
tgcgccctcgccgtcgcgcagtcgagcgacgacatcagcctgaccaccgtcggccgcccc
ttccccggggtcgaggtgcggatcgacgagaccggtgaaatcctgctgaagggtggcaac
atcttcgacggctacttcgagaacgagaaggccaccgccgaaagcctgcgcgacggctgg
ctctgcaccggcgacgccgggcagtggagcgatgacgggcagctgatggtgttgggccgg
ttgtcggaggtgatgcacaaggccgacggcacgaggttcatcccgacctatctggagaac
cggctgaagttcgcctcggcgatccgcgatgtctgcgtcatcggcaaggaccgcgccttc
ctctcggcgatcgtctgcatcgacttcgcggcggtcgggcaatgggcgcaggagcgcggc
ctgtcctacacctcctatgccgagctgtcgcagcggcccgaggtgctcgaactggtgcgc
cgcgagatcgcccggctcaacgatgcggtaccggccgagctgtcgatccgccgcttcgtg
aacctgcacaaggaattcgaccccgatgacggcgaggtgacccggacccgcaagctcaag
cgcggggtgatcgacgcgcgctacgggcagatcatcgacgcggtctatgccggtcacgac
gagatcgaatacgaggcgcgcatcacctacgaaagcggcgagaccggggtgctgacccgg
gttctgaagatcggcgacctggacggagggcagcactga

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