KEGG   Limimaricola variabilis: T8T21_10060
Entry
T8T21_10060       CDS       T09625                                 
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lvr  Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lvr03110]
    T8T21_10060 (clpB)
Chaperones and folding catalysts [BR:lvr03110]
 Heat shock proteins
  HSP100
   T8T21_10060 (clpB)
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_22 AAA_16 nSTAND3 Sigma54_activat IstB_IS21 TniB RuvB_N AAA_7 AAA_18 Mg_chelatase AAA_14 AAA_25 bpMoxR TsaE Zeta_toxin NACHT AAA_3 Torsin ResIII T2SSE Bac_DnaA
Other DBs
NCBI-ProteinID: WPY93462
LinkDB
Position
complement(2023299..2025914)
AA seq 871 aa
MNLEKFTERSRGFIQAAQTIAMRESHQRLSPEHLLKALMDDEQGLAANLIANAGGDAVRV
REAVNAAVAKLPKVSGDAGQTYLDQSTGRVLDEAEQIAKKAGDSFVPAERILMALAMVKS
KAKEALDAGKVSAQSLNAAINAVRKGRTADSANAEEGYEALKKYARDLTEAAEQGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLRNKRLMAL
DMGALIAGAKYRGEFEERLKAVLKEIEAAAGEIILFIDEMHTLVGAGKSDGAMDAANLIK
PALARGELHCVGATTLDEYRKYVEKDAALARRFQPLMVEEPTVEDTISILRGIREKYELH
HGVRISDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRSIL
QMQIEAEALRREDDEASKERLAKLEEELGALREKADAMTAKWQAERDKLEGARTLKERLD
RARAELDIAKREGNLAKAGELSYGVIPQLERELKAAEESDDPLMVEEAVRPEQIAEVVER
WTGIPTSKMLEGEREKLLRMEEELGRRVIGQHQAVRAVANAVRRARAGLNDENRPLGSFL
FLGPTGVGKTELTKAVAEYLFDDDQAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGVL
TEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLGA
QALSQLPDGADAGRAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRDDMAGIVEIQLARL
EKRLANRNIALLLDDPAKKWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDIRDGQ
EVHVSAGADGLIVGDRVSGSNRPKPEGAVLH
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgaacctcgaaaagttcaccgaacgctcgcgcggcttcatccaggccgcgcagacgatc
gcgatgcgcgagagccaccagcggctctcgcccgagcaccttctgaaggcgctgatggat
gacgagcaggggctcgcggccaacctgatcgccaatgcgggcggcgacgcggtccgcgtg
cgcgaggccgtcaatgccgccgtggccaagctgcccaaggtgtcgggcgatgccgggcag
acctatctcgaccagagcacaggtcgcgtgctcgacgaggccgagcagatcgccaagaag
gcgggcgacagtttcgtgccggccgaacggatcctgatggcgctcgccatggtgaaatcg
aaggccaaggaagcactcgacgccggcaaggtcagcgcgcagtcgctcaacgccgcgatc
aatgccgtgcgcaagggccgtaccgccgacagcgccaacgccgaagagggctacgaggcg
ctcaagaaatacgcgcgcgacctgaccgaggccgccgagcagggcaagatcgacccgatc
atcggccgcgacgaggagattcgccgcgccatgcaggtgctgtcgcgccgcaccaagaac
aacccggttctgatcggcgagcccggcgtcggcaagaccgcgatcgccgagggtctggcg
ctgcgcatcgtcgatggcgacgtgcccgaatccctgcgcaacaagcggctgatggcgctc
gacatgggcgcgctgatcgccggtgcgaagtatcgcggcgagttcgaggagcggctgaag
gcggtgctgaaggagatcgaggccgccgccggcgagatcatcctgttcatcgacgagatg
cacacgctggtcggcgcgggcaaatccgacggcgcgatggacgcggccaacctaatcaag
ccggcgctggcgcgcggcgagctgcactgcgtcggcgcgaccacgctcgacgagtaccgg
aaatatgtcgagaaggacgcggcgctggcccggcggttccagccgctgatggtcgaggag
ccgacggtcgaagacacgatttcgatcctgcgcggcatccgcgagaagtacgagctgcat
cacggtgtgcggatctccgactcggccctcgtggcggcggcgcagctttcgcaccgctac
atcaccgaccgcttcctgcccgacaaggcgatcgacctcgtcgacgaggccgcgagccgt
ctgcgcatggaggtggacagcaagcccgaggagctcgacgcgctcgaccgttcgatcctg
cagatgcagatcgaggccgaggcgctgcgccgcgaggatgacgaggcttccaaggagcgt
ctcgccaagctcgaggaagagctgggcgccctgcgtgagaaggcggatgcgatgaccgcc
aagtggcaggccgagcgcgacaagctcgagggcgcgcgcacgctcaaggagcggctcgac
cgggcccgtgccgaactcgacatcgccaagcgcgagggcaatctcgccaaggcgggcgag
ctgtcctacggcgtgatcccgcaactcgagcgcgaactcaaggcggccgaggaatccgac
gacccgctgatggtcgaggaagcggtgcggccggagcagatcgccgaggtggtggagcgc
tggaccggcatcccgacctcgaagatgctcgagggcgagcgcgagaagctgctacgcatg
gaagaggagctgggtcgtcgcgtgatcggccagcaccaggccgtgcgggcggtggcgaac
gccgtgcggcgcgcgcgggccgggctcaacgacgagaaccgtccattgggctcgttcctg
ttcctcgggccgaccggcgtcggcaagaccgagctcaccaaagccgtggccgagtatctc
ttcgatgacgatcaggcgatggtgcgcatcgacatgtcggagttcatggagaagcacgcg
gtcgcccgtctgataggcgcgcctccgggctatgtcggctatgacgagggcggcgtgctg
accgaagcggtgcggcgcaggccctaccaggtgatcctcttcgacgaggtcgagaaggcg
catccggacgtgttcaacgtgctgttgcaggtgctcgatgacggtgtgctgaccgacggc
cagggccggacggtcgacttcaagcagacgttgatcgtgctgacctccaacctcggcgcg
caggcgctgagccagctgcctgacggcgccgatgcgggacgtgccaagcgcgacgtgatg
gatgcggtgcgggcacatttccggcccgagttcctcaaccgcctcgacgagacgatcatc
ttcgaccggctcgggcgcgacgacatggctggcatcgtcgagatccagctcgcgcggctg
gagaagcgcctggccaaccgcaacatcgcgctgctgctcgacgatcctgccaagaagtgg
ctggccgacgagggctacgacccggtcttcggggcgcgaccgctcaagcgggtgatccag
cgggcgctgcaggaccagctggccgagatgatcctcgccggcgacattcgcgacggccag
gaggtgcatgtcagcgccggggccgacgggctgatcgtcggcgaccgggtctcgggcagc
aaccggcccaagcccgagggcgcggtgttgcactga

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