Limimaricola variabilis: T8T21_10060
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Entry
T8T21_10060 CDS
T09625
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lvr03110
]
T8T21_10060 (clpB)
Chaperones and folding catalysts [BR:
lvr03110
]
Heat shock proteins
HSP100
T8T21_10060 (clpB)
BRITE hierarchy
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
nSTAND3
Sigma54_activat
IstB_IS21
TniB
RuvB_N
AAA_7
AAA_18
Mg_chelatase
AAA_14
AAA_25
bpMoxR
TsaE
Zeta_toxin
NACHT
AAA_3
Torsin
ResIII
T2SSE
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
WPY93462
LinkDB
All DBs
Position
complement(2023299..2025914)
Genome browser
AA seq
871 aa
AA seq
DB search
MNLEKFTERSRGFIQAAQTIAMRESHQRLSPEHLLKALMDDEQGLAANLIANAGGDAVRV
REAVNAAVAKLPKVSGDAGQTYLDQSTGRVLDEAEQIAKKAGDSFVPAERILMALAMVKS
KAKEALDAGKVSAQSLNAAINAVRKGRTADSANAEEGYEALKKYARDLTEAAEQGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLRNKRLMAL
DMGALIAGAKYRGEFEERLKAVLKEIEAAAGEIILFIDEMHTLVGAGKSDGAMDAANLIK
PALARGELHCVGATTLDEYRKYVEKDAALARRFQPLMVEEPTVEDTISILRGIREKYELH
HGVRISDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRSIL
QMQIEAEALRREDDEASKERLAKLEEELGALREKADAMTAKWQAERDKLEGARTLKERLD
RARAELDIAKREGNLAKAGELSYGVIPQLERELKAAEESDDPLMVEEAVRPEQIAEVVER
WTGIPTSKMLEGEREKLLRMEEELGRRVIGQHQAVRAVANAVRRARAGLNDENRPLGSFL
FLGPTGVGKTELTKAVAEYLFDDDQAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGVL
TEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLGA
QALSQLPDGADAGRAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRDDMAGIVEIQLARL
EKRLANRNIALLLDDPAKKWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDIRDGQ
EVHVSAGADGLIVGDRVSGSNRPKPEGAVLH
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaaaagttcaccgaacgctcgcgcggcttcatccaggccgcgcagacgatc
gcgatgcgcgagagccaccagcggctctcgcccgagcaccttctgaaggcgctgatggat
gacgagcaggggctcgcggccaacctgatcgccaatgcgggcggcgacgcggtccgcgtg
cgcgaggccgtcaatgccgccgtggccaagctgcccaaggtgtcgggcgatgccgggcag
acctatctcgaccagagcacaggtcgcgtgctcgacgaggccgagcagatcgccaagaag
gcgggcgacagtttcgtgccggccgaacggatcctgatggcgctcgccatggtgaaatcg
aaggccaaggaagcactcgacgccggcaaggtcagcgcgcagtcgctcaacgccgcgatc
aatgccgtgcgcaagggccgtaccgccgacagcgccaacgccgaagagggctacgaggcg
ctcaagaaatacgcgcgcgacctgaccgaggccgccgagcagggcaagatcgacccgatc
atcggccgcgacgaggagattcgccgcgccatgcaggtgctgtcgcgccgcaccaagaac
aacccggttctgatcggcgagcccggcgtcggcaagaccgcgatcgccgagggtctggcg
ctgcgcatcgtcgatggcgacgtgcccgaatccctgcgcaacaagcggctgatggcgctc
gacatgggcgcgctgatcgccggtgcgaagtatcgcggcgagttcgaggagcggctgaag
gcggtgctgaaggagatcgaggccgccgccggcgagatcatcctgttcatcgacgagatg
cacacgctggtcggcgcgggcaaatccgacggcgcgatggacgcggccaacctaatcaag
ccggcgctggcgcgcggcgagctgcactgcgtcggcgcgaccacgctcgacgagtaccgg
aaatatgtcgagaaggacgcggcgctggcccggcggttccagccgctgatggtcgaggag
ccgacggtcgaagacacgatttcgatcctgcgcggcatccgcgagaagtacgagctgcat
cacggtgtgcggatctccgactcggccctcgtggcggcggcgcagctttcgcaccgctac
atcaccgaccgcttcctgcccgacaaggcgatcgacctcgtcgacgaggccgcgagccgt
ctgcgcatggaggtggacagcaagcccgaggagctcgacgcgctcgaccgttcgatcctg
cagatgcagatcgaggccgaggcgctgcgccgcgaggatgacgaggcttccaaggagcgt
ctcgccaagctcgaggaagagctgggcgccctgcgtgagaaggcggatgcgatgaccgcc
aagtggcaggccgagcgcgacaagctcgagggcgcgcgcacgctcaaggagcggctcgac
cgggcccgtgccgaactcgacatcgccaagcgcgagggcaatctcgccaaggcgggcgag
ctgtcctacggcgtgatcccgcaactcgagcgcgaactcaaggcggccgaggaatccgac
gacccgctgatggtcgaggaagcggtgcggccggagcagatcgccgaggtggtggagcgc
tggaccggcatcccgacctcgaagatgctcgagggcgagcgcgagaagctgctacgcatg
gaagaggagctgggtcgtcgcgtgatcggccagcaccaggccgtgcgggcggtggcgaac
gccgtgcggcgcgcgcgggccgggctcaacgacgagaaccgtccattgggctcgttcctg
ttcctcgggccgaccggcgtcggcaagaccgagctcaccaaagccgtggccgagtatctc
ttcgatgacgatcaggcgatggtgcgcatcgacatgtcggagttcatggagaagcacgcg
gtcgcccgtctgataggcgcgcctccgggctatgtcggctatgacgagggcggcgtgctg
accgaagcggtgcggcgcaggccctaccaggtgatcctcttcgacgaggtcgagaaggcg
catccggacgtgttcaacgtgctgttgcaggtgctcgatgacggtgtgctgaccgacggc
cagggccggacggtcgacttcaagcagacgttgatcgtgctgacctccaacctcggcgcg
caggcgctgagccagctgcctgacggcgccgatgcgggacgtgccaagcgcgacgtgatg
gatgcggtgcgggcacatttccggcccgagttcctcaaccgcctcgacgagacgatcatc
ttcgaccggctcgggcgcgacgacatggctggcatcgtcgagatccagctcgcgcggctg
gagaagcgcctggccaaccgcaacatcgcgctgctgctcgacgatcctgccaagaagtgg
ctggccgacgagggctacgacccggtcttcggggcgcgaccgctcaagcgggtgatccag
cgggcgctgcaggaccagctggccgagatgatcctcgccggcgacattcgcgacggccag
gaggtgcatgtcagcgccggggccgacgggctgatcgtcggcgaccgggtctcgggcagc
aaccggcccaagcccgagggcgcggtgttgcactga
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