Limimaricola variabilis: T8T21_11180
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Entry
T8T21_11180 CDS
T09625
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8T21_11180 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_11180 (mutM)
Enzymes [BR:
lvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
T8T21_11180 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
T8T21_11180 (mutM)
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T8T21_11180 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WPY93674
LinkDB
All DBs
Position
complement(2252143..2252994)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGAVIETAHVNRPDLRWPFPERMAERLTGRRVERLRRRSKYI
LADLEGDETLIVHLGMSGRMTVSGVRLGRFHVDHPAPAKHDHVVLEMAGGARVTFNDPRR
FGAMDLAPTATLEQHRLLRGIGPEPLGNTFDETYLTERLAGRAVPVKAALLDQKIVAGLG
NIYVCEVLHRAGIDPRRKAGRIAPARVATLVPLIREVLEEAIASGGSSLKDYRQADGAMG
YFQHGFRVYDRAGEGCATEGCDGTVERIVQSGRSTFLCRHCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaggtggagacggttcgtcgcgggttggcacccgcgatggaaggg
gcggtgatcgagaccgcccatgtcaaccggcccgacctgcgctggccgttccccgaacgc
atggccgaacggctcacgggacggcgggtggagcggctgcggcggcgctcgaaatacatc
ctcgcggatctcgagggcgacgagacgctgatcgtgcatctgggcatgtcggggcggatg
accgtctcgggcgtccggctcgggcggttccacgtggatcacccggcgccggccaagcat
gaccacgtggtgctggagatggcgggcggcgcccgcgtcaccttcaacgatccgcgccgc
ttcggggcgatggatctcgcgccgaccgccacgctcgagcagcaccggctgctgcgcggc
atcgggccggagcccttgggcaacaccttcgacgagacctacctgaccgagcggctcgcc
gggcgggcggtgccggtcaaggcggcgctgctcgaccagaagatcgtcgccgggctgggc
aacatctatgtctgcgaggtgctgcaccgggccgggatcgacccgcggcgcaaggcgggc
cggatcgcgcccgcgcgggtcgcgacgctggtgccgctgatccgcgaggtgctcgaggag
gcgatcgcctcgggtggctcctcgctcaaggattaccggcaggcggacggggcgatgggc
tatttccagcacggattccgggtctacgaccgcgcgggcgagggctgcgcgacggaaggt
tgcgacggcacggtggagcggatcgtgcagtcggggcgttccaccttcctgtgccggcac
tgccagaggtga
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