Limimaricola variabilis: T8T21_11470
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Entry
T8T21_11470 CDS
T09625
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_11470
Transporters [BR:
lvr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8T21_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPY93727
LinkDB
All DBs
Position
complement(2309723..2312851)
Genome browser
AA seq
1042 aa
AA seq
DB search
MNRLIDAAFGRTRTVMLALIAILGVGAVSYMAIPKESSPEIPIPLVHVFTTLEGIAPQDA
ERLLVEPMETEFASLTGLRKMEGTAREGHGAVMLEFEPGFDADQALDSVREAADRAANEL
PEDAAEPVVTETNTALFPILTAILSGPVPERTLNGLAEDLQDRIEGLGGVLEVDLAGARD
ELLEVLIDPTVFETYNISFEELIGQISRNNRLIAAGAIETGAGRIVLKVPGLIENVEDVM
ALPVKVRGDTVVTFGDVATIRRSFADPSGFARIDGQPALALEIKKRIGANVIDTVEAVKA
VVAEAQADWPDSVDINYMQDESEQVKTMLSDLEANVIAAVILVMIVIVWALGIRSALLVG
LSIPGAFLAGVAMLWAMGYTMNLVVLFSLILVVGMLVDGAIVTTELADRRLQEGASPKQA
YADAAKRMAWPVIASTATTLSVFFPLLFWSGTVGEFMKFLPITVLLTLTASLFMALVFIP
VLGGLIGRRPPQSAIDKAVLHAAERGDPRRLPGFTGAYVRLLERAILRPGATLLFAVAFL
LAAFGTYGQLGNGVSFFPSVEPDFMQVQLRARDNFSVFERDALVRRVEERLLDDPEIASV
YARSSSASGLGDEEVIGTIQLELTEWDSRRTAETIGAEIREEMADIAGIEVQVQTASNGP
SAGKPVRLELRGSDPEAQTAAVATIREEMERLGGFTDVTDTRPLPGVEWSIRVNRSEAAR
FGADVSLLGQAVQLLTQGITVADYRPADAEGSVDIRVRFPSDARTLEELQSLRVPTNAGL
VPISNFVTFEPSPRTGIIRRIDQRRVLSIEANVAPGELVDERITALRGALASAELPDSVE
WSFGGEAQDQAEAMIFLLGAFVSAILLMFTILLTQFNSVWQSLVVMSAIVFSVAGVLFGL
IVTGRPFGVVMGGIGVIALAGIVVNNNIVLIDTFNDLRRSGMSPREAALRSGAQRLRPVL
LTSVTTALGLMPMVIGANLNFFTREIVLGAPSTQWWTELSSAIAGGLIVATVLTLVVTPA
MLMLGQGRAIRAAAAPPEPASA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtctgatcgacgccgccttcgggcgcacccggacggtgatgctggcactgatc
gcgatcctcggggtcggcgccgtctcctacatggcgatccccaaggaaagctcgcccgag
atcccgatcccgctggtccatgtcttcaccacgctcgagggcatcgccccgcaggacgcg
gaacggctgctggtcgagccgatggagaccgaatttgcgtcgctcaccgggctgcgcaag
atggaaggcacggcgcgcgagggccacggcgcggtgatgctggagttcgagcccggcttc
gacgccgatcaggcgctcgactcggtgcgcgaggcggccgatcgcgccgcgaacgagctg
cccgaggacgcggccgagccggtggtgaccgagaccaacaccgcgctgtttccgatcctg
accgcgatcctgtcgggcccggtgcccgagcgcacgctcaacggcctcgccgaggatctg
caggaccggatcgaggggctgggcggcgtgctcgaggtcgacctcgccggcgcccgcgac
gagctgctcgaggtgctgatcgaccccaccgtctttgagacctacaacatctccttcgag
gagctgatcggccagatcagccgcaacaatcggctgatcgccgccggcgcgatcgagacc
ggcgccgggcgcatcgtgctcaaggtgccggggctgatcgagaacgtcgaggacgtgatg
gcgctgccggtcaaggtacgcggcgacacggtcgtcaccttcggcgacgtcgccacgatc
cgccgcagctttgccgacccctccggtttcgcccgcatcgacggccagccggcgctggcg
ctcgagatcaagaagcggatcggcgccaacgtcatcgacacggtcgaggcggtcaaggcg
gtggtggccgaggcccaggccgactggcccgacagcgtcgacatcaactacatgcaggac
gagagcgagcaggtgaagaccatgctctcggatctcgaggccaacgtcatcgccgccgtc
atcctggtgatgatcgtcatcgtctgggcgctcggcatccgctccgcgctgctggtcggg
ctgtcgatcccgggcgccttcctcgccggcgtcgcgatgctatgggcgatgggctacaca
atgaacctcgtggtgctgttctcgctgatcctggtggtcggcatgctggtcgacggcgcc
atcgtcaccaccgagctggccgaccggcggctgcaggagggggcgagcccgaagcaggcc
tatgccgacgcggccaagcgcatggcttggccagtgatcgcctcgaccgccaccaccctg
tcggtgttcttcccgctgctgttctggagcggcacggtcggcgagttcatgaagttcctg
ccgatcaccgtgctgctgacgctgaccgcctcgctgttcatggcgctggtcttcatcccg
gtgctgggcgggctgatcggccgcaggccgccgcaatcggccatcgacaaggcggtgctg
catgccgccgagcgcggcgacccgcgccgcctgccgggcttcaccggtgcctatgtgcgg
ctcttggagagagcgatcctgcgccccggcgcgaccctgctcttcgccgtggccttcctg
ctcgccgccttcggcacctatggccagctgggcaacggcgtcagcttcttcccctcggtc
gagccggatttcatgcaggtgcagctgcgcgcccgcgacaacttctcggtcttcgagcgc
gacgcgctggtgcgccgggtcgaggagcggctgctcgacgatcccgagatcgcctcggtc
tatgcccgctcgagctcggcctcgggcctgggcgacgaagaggtgatcggcacgatccaa
ctcgagctgaccgaatgggacagccgccgcaccgccgagacgatcggcgccgaaatccgc
gaggagatggccgatatcgccgggatcgaggtgcaggtgcagaccgcctcgaacggcccc
tccgccggcaagccggtgcggctcgaactgcgcggctccgacccggaggcgcagaccgcg
gcggtggccacgatccgcgaggagatggagcggctcggcggcttcaccgatgtcaccgac
acccgccccctgcccggcgtcgaatggagcatccgcgtcaatcgctcggaagcggcccgc
ttcggcgccgacgtctcgctcctcggccaggcggtgcagcttctgacccagggcatcacc
gtggccgactaccgccccgccgatgccgagggctcggtcgacatccgcgtgcgctttccc
tccgacgcgcgcacgctcgaggagctgcagtcgctgcgcgtgccgaccaatgccgggctg
gtgccgatctcgaacttcgtgactttcgaacccagcccgcgcaccggcatcatccgccgc
attgatcagcgccgggtgctgtcgatcgaggccaatgtcgcgccgggagagctggtcgac
gagcggatcaccgcgctgcgcggagcactggcctcggccgaactgcccgacagcgtggag
tggtccttcggcggcgaggcgcaggaccaggccgaggcgatgatcttcctcctcggcgcc
ttcgtctcggcgatcctactgatgttcacgatcctgctgacccagttcaacagcgtctgg
cagagcctcgtggtgatgtcggcgatcgtcttctcggtcgcaggggtcctgttcggcctg
atcgtcaccggccgcccctttggcgtcgtgatgggcggcatcggggtgatcgcgctggcg
ggcatcgtggtgaacaacaacatcgtgctgatcgacaccttcaacgacctgcgccggtcc
ggaatgagcccgcgcgaggcggcgctgcgcagcggcgcgcagcgtctgcgaccggtgctg
cttacctcggtgaccacggcgctggggctgatgccgatggtgatcggcgcgaacctcaac
ttcttcacccgcgagatcgtgctcggcgcgccctcgacccagtggtggaccgagctgtcg
agcgcgatcgccggcgggctgatcgtggcgacggtgctgacgctggtggtgacccccgcc
atgctgatgctgggacagggtcgggccatccgcgcggccgccgcaccccccgagcccgcc
tcggcctga
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