Limimaricola variabilis: T8T21_11585
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Entry
T8T21_11585 CDS
T09625
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
T8T21_11585
Enzymes [BR:
lvr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
T8T21_11585
Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
T8T21_11585
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
WPY96072
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All DBs
Position
complement(2333291..2334430)
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AA seq
379 aa
AA seq
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MDENMRPRPNAGFSNWVAGYRPRALSAGVSGATFDRAFASAGYIPGVIEKDRNQAEFTKT
LGEYLSTAASDTRVETGRAMLSQYSSLLSEIEARYGVDRQTVLAVWGMESNFGKRRGDVP
VVSALATLAYEGRRGRFFEQQLTSALKILQNGDVSPENMKGSWAGAMGHTQFIPTSYEAY
AADFRGDGRRDIWSDDPTDGLASTAKYLSSFGWRRGQPWGVEVVLPAGFNYGLAGGTKKS
AAEWQALGVQAATGGRIGDFGAAEILVPEGAQGAAFMTFKNFDVIKRYNAADAYAIGVGH
LGDRIAGAGPFRTPMATGRALNRAERSEVQRRLTALGFDTGGADGIIGPNTTAAIRRYQQ
VNGLPVDGFASESLLKRLR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacatgcgcccccgccccaatgccggtttttcgaactgggtcgcaggctac
cgcccgcgcgcgctgtcggccggcgtctccggcgccaccttcgaccgcgccttcgcctcc
gccggctacatccccggcgtgatcgagaaggaccgcaaccaggccgagttcaccaagact
ctgggcgagtacctctccaccgccgcctccgatactcgtgtcgagaccggccgggcgatg
ctgtcgcaatattcgagcctgctctcagagatcgaggcccgctacggcgtcgaccggcag
accgtgctcgcggtctggggcatggaaagcaatttcggcaagcggcgtggcgacgtgccc
gtggtctcggcgctcgcgaccctcgcctatgagggccgcaggggccgcttcttcgagcag
cagctcacctcggcgctcaagatcctgcagaacggcgatgtcagccccgagaacatgaag
ggcagctgggccggggcgatgggccacacccagttcatccccacctcctacgaggcctat
gccgccgatttccgcggcgacggacggcgcgacatctggtcggacgacccgaccgacggt
ctcgcctcgaccgcgaaatacctctccagcttcggctggcgccggggccagccctggggc
gtcgaggtggtgctgcccgcgggcttcaactacggccttgccggcggcaccaagaagagc
gccgccgaatggcaggcgctgggcgtgcaggcggcgaccggcgggcggatcggcgatttc
ggcgcggccgaaatcctggtgcccgagggcgcgcagggcgcggccttcatgaccttcaag
aacttcgacgtcatcaagcgctacaacgccgccgacgcctatgcgatcggcgtcggtcat
ctgggcgaccggatcgccggagccgggccgttccgcacgccgatggccaccggtcgggcg
ctgaaccgggccgagcgttccgaggtgcagcgccgcctgacagcgctgggcttcgacacc
ggcggcgccgacggcatcatcggcccgaacactaccgccgcgatccgccgctaccagcag
gtcaacggcctgccggtcgacggcttcgcctcggagtcgctgctcaagcggctgcgctga
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