Limimaricola variabilis: T8T21_11965
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Entry
T8T21_11965 CDS
T09625
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lvr
Limimaricola variabilis
Pathway
lvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T8T21_11965 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_11965 (recO)
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T8T21_11965 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
T8T21_11965 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WPY93821
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All DBs
Position
2402617..2403345
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AA seq
242 aa
AA seq
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MISWREEGALLRVRRHGEGSAIIEVLTRGHGLHAGVVRGGGSRRIAPLLQPGAQLDLTWT
ARLGEHLGNFTFEPVRSRADRVMADRLALAGLNAVAALLVSVLPERDPHPPLYDRTVALL
DLLGETEIWPLAYLRWELSLLEEMGFALDLSRCAVTGATEGLDLVSPKSGRAVSRAGAGA
WASKLLPLPPVLRGEGDAAAADVIAALATTGWFIEHRLLPGSGDRPLPPARARLIEAIER
TG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatctcctggcgcgaggagggggcgctgctgcgcgtccgccgccatggcgaggggtcg
gccatcatcgaggtgctgacccgtggccatgggctgcatgccggggtggtgcggggcggc
ggctcgcggcgcatcgcgccgctcctgcagcccggcgcgcagctcgacctgacctggacc
gcgcggctgggcgagcatctgggcaacttcaccttcgagccggtgcgctcgcgcgccgac
cgggtgatggccgatcgcctggcgctggccggtctcaacgcggtggcggcgctgctggtc
tcggtgctgcccgagcgcgatccgcacccgccgctctatgatcgcaccgtggcgcttctc
gacctgttgggcgagaccgagatctggccgctggcctatctgcgttgggagctgtcgctc
ctggaggagatgggattcgcgctcgacctctcgcgctgtgcggtgaccggcgcgaccgag
gggctggatctcgtcagccccaaatccggccgcgcggtcagccgggcgggggcgggagca
tgggcgtccaagctcctgccgctgccgccggtgctgcgcggcgagggcgatgcggcggcg
gcggacgtcatcgccgcgctcgccaccaccggctggttcatcgagcacaggctgctgccc
ggttcgggcgaccggccgttgccgccggcgcgggcgcggctgatcgaggcgatcgagcgg
accggctga
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