Limimaricola variabilis: T8T21_12555
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Entry
T8T21_12555 CDS
T09625
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_12555
Enzymes [BR:
lvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
T8T21_12555
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T8T21_12555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WPY93935
LinkDB
All DBs
Position
2507720..2508778
Genome browser
AA seq
352 aa
AA seq
DB search
MSGVQTITVGADEGDQRLDRWLKRHFPHLVQTRIEKMCRKGELRVDGGRVKPATRLEVGQ
SVRVPPIPEAHEVESRRVDRSQISKKDAEMIRGCVIYRDDHIIAINKPAGLPTQGGSGVA
KHVDGLAEALRDGFEDKPRLVHRLDKDTSGVLLLARTRTAAKGLTENLKHRETRKIYWAA
VAGVPQPRAGTIKYGLVKAMGHGKGGEGEKMQCIHPAEVDKTPGAKRAVTDFATLSALGQ
RVSWMALVPVTGRTHQLRAHMAEIGHPVVGDGKYGGSSQENLGDGWGAGLGAEIDRKLHL
HARSLKIEHPVTKAILQIVAPLPEHMERTWDFFGWDTRDAPMDPFDPDELDG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtgcagaccatcaccgtgggtgcggacgagggcgaccagcggctcgaccgc
tggctcaagcggcactttccgcatctcgtccagacccggatcgagaaaatgtgccgcaag
ggcgagcttcgggtcgatggcggccgcgtgaagcccgccacccggctcgaggtcggccag
agcgtgcgcgtgcccccgatccccgaagcgcatgaggtcgagagccggcgcgtcgatcgc
agccagatctccaagaaggacgcggagatgatccgcggctgcgtgatctaccgtgacgac
cacatcatcgcgatcaacaagccggcaggcctgcccacgcagggcggttccggcgtggcg
aaacatgtcgacgggctcgcggaagcgctgcgcgacggcttcgaggacaagccgcgcctc
gtgcaccggctcgacaaggatacctccggcgtgctgctgctggcgcgcacccgcaccgcc
gctaaggggctgaccgagaacctcaagcaccgcgagacgcgcaagatctattgggctgcc
gtcgccggcgtgccgcagccgcgtgccggcacgatcaagtacggccttgtgaaggcgatg
gggcatggcaagggcggcgagggcgagaagatgcagtgcatccaccccgccgaggtcgac
aagaccccgggcgccaagcgcgccgtgaccgatttcgcgacgctcagcgcgctcggccag
cgcgtgtcgtggatggcgctcgtcccggtgacgggccgcacccaccagctgcgcgcccac
atggccgagatcggccacccggtggtgggcgacggcaagtatggcggctcgagccaggaa
aatctcggcgatggctggggcgctggcttgggcgcggagatcgaccgcaagctgcacctg
cacgcccgctcgctcaagatcgagcaccccgtgaccaaggcaatcctgcagatcgtggcg
cccttgcccgagcacatggagcggacctgggacttcttcggctgggacacgcgcgacgcg
ccgatggacccgttcgatccggacgaactcgacggatga
DBGET
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