Limimaricola variabilis: T8T21_12830
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Entry
T8T21_12830 CDS
T09625
Name
(GenBank) beta-ketoacyl synthase N-terminal-like domain-containing protein
Organism
lvr
Limimaricola variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
CurL-like_PKS_C
Thioesterase
PP-binding
PS-DH
RhiE-like_linker
PKS_DH_N
adh_short
Thiolase_N
Beta-ketacyl_N
adh_short_C2
Abhydrolase_1
Hydrolase_4
Motif
Other DBs
NCBI-ProteinID:
WPY93981
LinkDB
All DBs
Position
2566310..2572552
Genome browser
AA seq
2080 aa
AA seq
DB search
MAGAGDLELGDIAITGMAVDLPGAGTLDAFWEMLRKRRSAIRRLTPEEMARAGADTAGPD
HVPYGAPLDSFDKFDAGFFGLSPRDAAIMDPQHRRFIETAWAALENAGHVPEHFDGAIGV
YAGCGPNEYFNHNVMANAALVESAGPFLLRHTGNDKDFLATRLAHMLDLTGPAVSVQTAC
STSLVAVHMAAQALLTGECDMALAGGVTILSGQGRGHRWREGDILSPDGQCRAFDHRAAG
TVFGSGAAAVVLRRLEDALNDGDHVWAVLKGSAINNDGSRKASYLAPSVEGQARAVAAAL
RVAGVGAESLGFVECHGTGTPLGDPIEVAALTRAFRETTDRAGYCRIGSVKTGIGHTDTA
AGAASLVKAALALHHRTIPGMPHFEAANPALALEGSPFEVAAETVPWPHGAAPRRAGVNS
LGVGGTNAHAVLEEAPARAPATESDWPFQLIRVSGRSRAALQATAAQLAAHLRAHPEQPL
ADVAHTLATGRRALRHRRVLLADSHEEAARLLEAGGAVQEAQAAPEIVFMLPGGGAQQPG
MGHDLYETEPVFRDCMDRGFAAMGSAGAELRELWAAAPGEEAEAAAAALRRPSRQLPLLM
IVTHALAQLWIGWGVRPDRLIGHSMGENLAAVLAGVMSFEEGLGLVRLRGALFEETAPGA
MLSVPLTPSDLRAELGPDLDIAAINAPELCVASGPVAAIEALAERLATRGIETRRVPIEV
AAHSRLLDPILPRFEAHLRDMTLSPPRIPIVSNRSGVPLTDAEATDPAYWVGHLRHMVDF
DAGLHGMGDGPRICIEMGSGGILGALAALQPGIGAGRVLPGLRPAQEPGSEDRWMILALG
RLWAMGGWFDEAQLAGEGRRRLPLPGYAFERERHWVEPDAAPGRIAAPAKAEPVREDDIA
RWAWQPGWRRRYPDGNFEAGGDLAALPPETWLVLRDETGLGDALVARLRAGGHRVATVVA
GPNELRRGPEDWQVPVGAGEAPFARLVAALEREGMLPDRVLHLWTVTGSGAPGLAALHVQ
AMQERGYWSLLHLARAWHAAQGDRPLRLVTVSSDAQAVTPQERPDPAKATLAGPAMVIGR
ELPGIGLSWLDISAPSRANRAALAEAVLEEAFAAPEPAPVSWRNGVRRRREPLRATLPET
PDLPLRPGGAVLITGGLGGIGLTLAETLARDWQAGIALVSRRTLPPRADWPGLAAGGARQ
AELLRALLRLEAMGARIEVLRADVTDPEEMREAVAEAEARLGPLSGVIHAAGRLDDAPVL
GRSPEASEAVIGPKLQGLMVLDTLFPDGRLDWMALCASSSGWTLPAGQADYVAANAALDA
WAQRRAGGATRVVAIDWGAWADTGMAAASQRAAEPVEEGEALVLPMLDRRRDEANGETVL
TARWSPASRWFLDQHRTRAGDALLPGTGHAELLAEAAQALGLAPVAVQDLRFLAPLRCPD
AGVTRLRLRIGGGEEMRPVEIEAAPPGEDWQVMATAQLGSHAKARGRLDPEAIAARLPAP
EALALPQEAHLDFGAQWRVTGEARLGQGEGLARLRLPPGSETGMALHPGLLDIATGWAIS
LIDGYDPARFWVPAGYGTLRLHAPLPTEILSHVRLTGQDDGAARFDVVLATPEGQICAEI
EGFALHRLAGELRFATAAQAQAGPVQPPEIRLGIRRAEGGRAFIAAMGAGLPQIAMTALP
LPDLIAAQETAPPLPVIAVPETAVLQPEAGFETETEARLAKHWTALLGVEGIGPDDSFFD
LGGHSLTAVRLFAAIRRETGTALPISALFETPTIRGLAARLDAKSLNPASPAAPALVAVP
ESHTHLVPLGRAGTGMPFYVAAGMFGNVMNLRHLAQHLGADRPVWGLQARGVAGDAAPHD
SFEDAARDCLAEMKKVHPGGPWMIGGYSGGGITAFEMARQLQAAGEEVAAVMLLDSPLPV
RPTLSLRDRLAIQAIELRRAGPLYPALWAGRRLRWEIDRRRYGREAGTPAASEAEAAVEN
AFYAASAAYELRCWDGPLTLFRPPLTGRWRLPGGRLVNIDRRYVIEDNGWRRWAPNLDVV
EVPGDHDSMVLEPNVRALAARIRTRLAALDPGGPRLQAAE
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggccggcgatctggaattgggcgatatcgcgatcaccggcatggccgtggac
ctgcccggcgccggcacgctcgacgcgttctgggagatgctgcgcaagcgccgcagcgcg
atccgtcgcctgacccccgaggagatggcgcgggccggtgccgatacggccggccccgac
cacgtgccttacggcgcgccgctcgacagcttcgacaagttcgacgcgggcttcttcggg
ctgagcccgcgtgatgccgcgatcatggacccgcagcaccgccgcttcatcgagaccgct
tgggccgcgctcgagaatgccggccacgtgcccgagcatttcgacggtgcgatcggcgtc
tatgccggatgcggcccgaatgagtacttcaaccacaacgtcatggccaacgccgctctg
gtcgaaagcgccggtcctttcctgttgcgccacaccggcaacgacaaggatttcctggcg
acccggctggcgcacatgctcgacctgaccggcccggccgtgtcggtgcagaccgcctgc
tcgacctcgctggtggcggtgcacatggccgcgcaggcgctgttgaccggcgaatgcgac
atggcgctggcggggggcgtcacgatcctttcgggacaagggcggggccatcgctggcgc
gagggagatatcctgtcgcccgacgggcaatgccgggcctttgatcaccgtgccgccgga
acggtcttcggctctggcgcggcggcggtggtgctgcgccggctcgaggatgccctcaac
gacggcgatcacgtatgggcggtgctgaagggcagcgccatcaacaatgacggctcccgc
aaggccagctatctcgccccttcggtcgaggggcaggcgcgcgcggtcgcggcggcgctg
cgggtggccggggtcggggcggagagcctgggcttcgtggagtgccacggcaccggcacg
ccgctcggagacccgatcgaggtcgcggcgctgacccgagccttccgcgaaacgaccgac
cgcgccgggtactgccggatcggctcggtcaagaccgggatcggccataccgacaccgct
gcaggcgcggcctcgctggtcaaggcggcgctggcgctgcatcaccggacaatccccggc
atgccccatttcgaggcagcgaacccggcattggcgctcgaggggtcgcccttcgaggtg
gcggcggagacggtgccttggccacacggcgccgcgccacgccgcgccggggtcaattcg
ctcggcgtcggcgggaccaacgcccatgcggttctggaggaagcgcccgcacgcgccccg
gccacagagagcgactggccgttccagctgatccgggtctcgggccgcagccgcgccgcg
cttcaggccactgcagcgcagcttgcggcgcatctgcgggctcatccggagcagccactg
gccgacgtggcccatacgctggccaccggccggcgcgccctgcgccatcgccgggtgctg
ttggccgacagccacgaagaggcggcaaggcttctcgaggcgggcggtgcggtgcaggag
gcgcaggcagcgcccgagatcgtcttcatgctgcccggcggcggcgcgcagcagcccggc
atgggccacgacctctacgagaccgagccggtgttccgcgactgtatggaccggggcttt
gccgccatgggctcggcaggggccgagcttcgggaactgtgggccgcggcacccggcgag
gaagccgaagctgcagcggccgcgctgcgcaggccgtcgcggcaactgccgctgctgatg
atcgtcacgcatgcgctggctcagctctggatcggctggggcgtgcggcccgatcggctg
atcggtcactcgatgggcgagaacctggcggcggtgctggccggggtgatgtccttcgag
gaggggctcgggctggtgcggttgcgcggcgcgctgttcgaggaaaccgcgccgggcgcg
atgctctcggtaccgctcaccccctcggatctgcgcgccgaactcggccccgatctcgac
atcgcggcgatcaacgcgccggagctttgtgtggcatccggcccggtggcagcgatcgag
gctctggcggagcggctcgccacgcgtggcatcgaaacgcgccgggtgccgatcgaggtg
gccgcccacagccggctgctcgacccgatcctgccgcgcttcgaggcgcatctgcgcgac
atgacgctgtcgccgccacggataccgatcgtttcgaaccgcagcggcgttcctctcacc
gacgccgaagcgaccgatccggcctactgggtcgggcatctgcgccacatggtggatttc
gacgccggtctccacgggatgggcgacgggccccggatctgcatcgagatgggatccggg
ggcatcctcggcgccttggccgcgctgcagcccgggatcggcgcgggacgggtgctgccg
gggctgcgcccggcgcaggagcctggctccgaagatcgctggatgatcctcgcgctgggg
cggctctgggcgatgggcggttggttcgacgaggcgcagctcgccggtgaggggcgccgc
cgcctgccgctgcccggctatgccttcgagcgggagcgccactgggtcgaacccgacgcc
gcgcccggccgtatcgccgccccggccaaggcggagcccgtacgcgaggatgacatcgcg
cgctgggcctggcagcccggctggcggcggcgctaccccgatgggaatttcgaggcgggc
ggtgacctggcggcgctgccgcccgagacctggctggtgctgcgcgacgagaccgggctg
ggcgacgcgctggtcgcacggctgcgcgcgggtgggcaccgcgttgccaccgtggtggcg
gggccaaacgagctgcggcgcggccccgaggactggcaggtgccggtcggggccggtgag
gcgccattcgcccggctggtcgcggcgctggagcgcgagggaatgctgcccgaccgagtg
ctgcatctgtggacggtgaccggctccggcgcccccggtcttgccgccttgcatgtgcag
gcgatgcaggagcgcggctactggagcctgctgcacctcgcccgggcctggcacgcggcg
cagggcgaccgaccgctgcgcctcgtcaccgtcagcagcgatgcccaggcggtgacgccg
caggagcggccggacccggccaaggcgacgctggccgggcccgcgatggtgatcggccgc
gaattgccggggatcgggctgtcctggctcgacatctccgcaccgagccgcgccaaccgc
gcggcgctggccgaggcggttctggaagaagccttcgccgcgcccgaaccggcgccggtg
agctggcgcaacggggtgcggcgccggcgggagccgctccgcgcgacattgccggaaacg
cccgatctgccgctgcgacccggcggcgcggtgctgatcaccggcgggctgggcggcatc
ggtctgaccttggccgaaaccctggcgcgcgactggcaggcggggatcgcgctggtgtcg
cgccggaccctgccgccgcgcgccgactggccgggtctggcggcgggcggtgcccgtcag
gcggaactgttgcgtgcgctgctccggctggaggccatgggcgcgcggatcgaagtgctg
cgcgccgacgtcaccgaccccgaggaaatgcgcgaggcagttgccgaggccgaagcccgg
ctcgggccgctcagcggcgtgatccacgccgccgggcgcctcgacgacgcgccggtgctt
ggccgttcgccggaggcgagcgaggcggtgatcgggcccaagctgcaggggctgatggtg
ctcgatacgctgttcccggacggtcggctcgactggatggcgctttgtgcctccagctcc
ggctggaccctcccggcggggcaggccgactatgtcgccgccaacgccgcgctcgacgcc
tgggcgcagcgccgcgcgggcggcgcgacgcgggtggtggcgatcgattggggcgcctgg
gccgacaccggcatggccgccgcatcgcaaagggcggcggagccggtcgaagagggcgag
gccctggtgttgccgatgctggatcggcgcagggacgaggcgaatggcgagacggtcctg
accgcccgctggagccccgcttcgcggtggttcctcgaccagcaccggacgcgggcgggc
gacgcgctgctccccggcacaggccatgccgaattgctcgccgaggcggcgcaggcgctg
gggctcgcgccggtcgccgtgcaggatctgcgtttcctcgcgccgctgcgctgccccgat
gcgggcgtgacgcggttgcggctgcggatcggcgggggtgaggagatgcggccggtagag
atcgaggccgcgccgcccggcgaggattggcaggtgatggcgaccgcgcagctcggcagc
catgccaaggcgcgcggccggctcgatccggaggccatcgcggcccggcttccggccccc
gaggcgttggcgctgccgcaggaggcgcatctcgatttcggtgcccagtggcgggtcacc
ggcgaggcgcggctgggtcaaggcgaaggtctggcgcggctgcggctgccgccggggtcc
gagaccggcatggcgctgcatccgggtcttctggacatcgccaccggttgggcgatctct
ctgatcgacggctatgatccggcgcggttctgggtgccggcgggatacgggacgctgcgg
ctgcatgcgccgctgccgaccgaaatcctgagccatgtccggctgaccggccaggacgat
ggcgcagcgcggttcgacgtcgtgctggcgacgcccgaagggcagatctgcgccgaaatc
gaaggattcgcgctgcaccgtctcgcaggcgaattgcgcttcgcgaccgccgcgcaagca
caggcggggccggtgcagccgcctgaaatccggctcggcatccgtcgcgccgagggcggg
cgcgctttcattgccgcgatgggcgcgggcctgccgcagatcgcgatgaccgcgctgccg
ctgcccgacctgatcgcggcgcaggaaacggccccgccgctcccggtcatcgcggtgccc
gaaacggcagtgctgcagcccgaggccgggttcgagacagagaccgaggcccggcttgcc
aagcactggaccgcattgctgggcgtggaggggatcggccccgatgacagtttcttcgac
ctcggggggcattcgctgacggcggtgcggctgttcgcggcgatccggcgagaaaccggc
acggcgctgccgatctcggcgctgttcgagacgccgacgatccgcggtctcgccgcccgg
ctcgatgcgaagtccctgaaccccgcaagcccggctgccccggcgctggtggcggtgccc
gagagccatacccatctcgtgccgctgggacgggccgggaccggcatgccgttctatgtg
gcggcgggcatgttcggcaacgtgatgaatctgcggcacctggcgcagcatctgggggcc
gaccgcccggtctgggggttgcaggcgcgaggtgtcgcgggcgatgccgcgccgcatgac
agcttcgaggatgcggctcgcgactgcctggccgagatgaaaaaggtgcatcccggcggg
ccctggatgatcggcgggtattccggtggcggcatcaccgccttcgagatggcgcggcaa
ttgcaggcggcgggcgaagaggtcgccgcggtgatgctgctcgattcgccgctaccggtt
cggccgacgctgagcctgcgcgaccggctggcgatccaggcgatcgagttgcgccgggcc
ggcccgctctacccggcgctctgggccgggcggcggctgcgctgggagatcgaccgccgt
cgctatggccgcgaggctgggacaccggcggcgagcgaggccgaggccgcggtcgagaac
gctttctacgcggcctcggccgcctatgagctgcggtgctgggacggcccgctgaccctg
ttccgcccgccgctcacgggtcgctggcgcctgccgggcgggcgattggtcaacatcgat
cgccgttacgtaatcgaggataacggctggcgccggtgggcgccaaatctggacgtggta
gaagtgccgggcgaccatgacagcatggtgctcgaacctaatgtccgggcgctggccgcg
cgcattcggacgcggctcgcggcgctcgatccgggcggaccacgacttcaggcggcggag
tga
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