Limimaricola variabilis: T8T21_13235
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Entry
T8T21_13235 CDS
T09625
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T8T21_13235 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvr01007
]
T8T21_13235 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvr03016
]
T8T21_13235 (pheT)
Enzymes [BR:
lvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
T8T21_13235 (pheT)
Amino acid related enzymes [BR:
lvr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
T8T21_13235 (pheT)
Transfer RNA biogenesis [BR:
lvr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
T8T21_13235 (pheT)
Prokaryotic type
T8T21_13235 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
WPY94059
LinkDB
All DBs
Position
2647494..2649887
Genome browser
AA seq
797 aa
AA seq
DB search
MKFTLSWLKDHLDTNASVDEIAEALTDLGLEVEGIENPAAALENFVIGKVVAAEKHPDAD
KLQVCRVELPGGEDQIICGAPNARQGITVVVARPGTYVPGPDFTIGVGKIRGVESHGMMC
SERELGLGDAHEGIIELPSGEVGQSFADWLAENDPAKVDPVIEIAITPNRGDALGIRGIA
RDLSARGVGTLKPLEVNSVQGSYDCPIGVEIAPDTRDGCPIFAGRLIRGVKNGPSPDWLQ
DRLRAIGLRPISFLVDVTNYITYDLNRPLHVFDADKVAGNLRVHRAEGGESFAALDEKTY
TLDQGMIVISDDNGVESLAGIMGGVDTSVTEETTNVFVESALWNPVQIALTGRALRIHSD
ARQRFERGIDTDFVTTGLQIAVRMIVDHAGGEASKSVIAGATPDNSRAYRFDPKAVTRIV
GMEIPVKEQRQTLDRLGFRLDGETAHVPAWRSDIQGEADLVEEVARVASLSKLQGVPLPR
PEGVAQPVLTPMQARLSKARRTTASLGYDECVTYSFIDAQAASLFGGGSDATRLENPISS
EMSHMRPDLLPGLLRAAARNQARGQADLALFEAGHVFWGGEPGEQRLCVAGLLTGRTGPK
DVHGAARPVDLYDAKADAEAVLASMGAPAKVQILRGGESWWHPGRHGRICLGPKKALGVF
GELHPRVLAELDVKGPAVAFVLWPEEVPLPRQNGAARPAFTPPALQPVERDFAFVVDAQV
EALTLVNAAAGADKALISDVRVFDQFQGGSLGEGRKSVAITVRLQPTEKTLTEKEIEAVG
AKIVEKVTKATGGELRG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccctctcctggctcaaggaccatctcgacaccaacgccagcgtcgacgag
atcgccgaggcgctgaccgatctcgggctcgaggtcgaaggcatcgagaaccccgccgcg
gccctcgagaacttcgtcatcggcaaggtcgtcgccgccgagaagcaccccgacgccgac
aagctgcaggtctgccgggtcgaactgcccggcggcgaggaccagatcatctgcggcgcg
cccaacgcgcgccagggcatcaccgtggtcgtcgcccgccccggcacctacgtgcccggc
cccgacttcaccatcggcgtcggcaagatccgcggcgtcgagagccacggcatgatgtgc
tcggagcgcgagctgggtctgggcgacgcgcatgagggcatcatcgagctgccctcgggc
gaggtcggtcagagcttcgccgactggctggccgagaacgatcccgccaaggtcgacccc
gtcatcgagatcgcgatcacgcccaaccgcggcgacgcgctcggcattcgcggcatcgcg
cgcgacctctcggcccggggcgtgggcacgctgaagccgctcgaagtgaactcggtgcag
ggcagctacgactgcccgattggcgtcgagatcgcgcccgacacgcgcgacggctgcccg
atcttcgcgggccgtctcatccgcggcgtgaagaacgggccctcgcccgactggctgcag
gaccgcctgcgcgccatcggcctgcgcccgatcagcttcctcgtcgacgtgaccaactac
atcacctacgatctgaaccggcccctgcacgtcttcgacgccgacaaggtggccggcaat
ctgcgggtgcaccgcgccgagggtggcgagagcttcgccgcgctcgacgagaagacctac
accctcgatcagggcatgatcgtgatctccgacgacaatggcgtcgagagcctcgcgggg
atcatgggcggcgtcgacaccagcgtgaccgaggagaccaccaacgtcttcgtggagagc
gcgctgtggaacccggtacagatcgcgctgaccggccgtgcgcttcggatccactcggat
gcgcgccagcgctttgagcgcggcatcgacaccgatttcgtcaccaccggtctgcagatc
gcggtgcggatgatcgtcgaccatgccggcggcgaggcgtcgaaatcggtgatcgcgggg
gcgacgccggacaacagccgggcctatcgcttcgacccgaaagcggtgacgcggatcgtc
ggcatggagatccccgtcaaggagcagcgccagacgctcgaccgtctgggcttccggctc
gacggcgagacggcgcatgtcccggcctggcgctcggacatccagggcgaggccgacctc
gtcgaggaagtggcgcgcgtcgcctcgctgtccaagctccagggcgtgccgctcccgcgc
cccgaaggcgtggcgcagcctgtgctgacgccgatgcaggcgcggctgtccaaggcgcgg
cgcaccaccgcgagcctcggctatgacgaatgcgtcacctacagcttcatcgacgcgcag
gccgcatcgctgttcggcggcggctcggatgcgacccggctggaaaacccgatctcctcg
gagatgagccacatgcgccccgacctgctgccgggcctgctgcgcgccgccgcgcgcaat
caggcgcgcgggcaggcggatctcgcgctgttcgaggcggggcacgtgttctggggcggt
gagccgggcgagcagcggctctgcgtcgcgggcctgctgaccggccggaccggcccgaag
gacgtgcatggcgccgcgcggcccgtcgatctctacgacgccaaggccgatgccgaggcc
gtccttgcctccatgggcgcgcccgccaaggtgcagatcctgcgcggtggcgagagttgg
tggcatccgggccgtcacggccggatctgcctcggcccgaagaaggcgctgggcgtcttc
ggcgaactgcacccccgcgtgctcgcggaactcgacgtgaagggtccggccgtggccttc
gtgctctggccggaggaggtgccgctgccgcgccagaacggcgccgcgcgcccggccttc
acgccgcccgcgctgcagccggtcgaacgcgacttcgccttcgtggtggatgcgcaggtc
gaggcgctcaccctggtcaacgcggccgctggcgcggacaaggcgctgatctccgatgtg
cgggtcttcgaccagtttcagggcggctcgctcggtgaggggcgcaagtcggtggcgatc
acagtgcggctgcagccgaccgagaagacgctcaccgagaaggagatcgaggccgtgggc
gccaagatcgtcgagaaggtgaccaaggccaccggcggcgagctgcgcggctga
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