Limimaricola variabilis: T8T21_13385
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Entry
T8T21_13385 CDS
T09625
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00730
Thiamine metabolism
lvr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
T8T21_13385 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_13385 (rsgA)
Enzymes [BR:
lvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
T8T21_13385 (rsgA)
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
GTPases
T8T21_13385 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
FeoB_N
PduV-EutP
Septin
AIG1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WPY94087
LinkDB
All DBs
Position
complement(2673138..2674157)
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AA seq
339 aa
AA seq
DB search
MTDLTLTDLGWSDHFARQLEEGDTPARIAEIHRTILVALTPEGPVKLLAPSGAGSFAVGD
WVGMRDGAARMRLAPRSQIARKAAGHTVSRQLVAANVDTLGIVTSCNDDFNPARLERYVA
LAMAGDCLPLVILTKSDMVDDPEPYLAQARAISPLVVAMALNARDLDDAARLEPWCGPGH
TLALVGSSGVGKTTLQNALTGGAEATAGIREDDAKGRHTTTYRALRRCRAGGWLIDTPGM
RELQLTDTAEGIEELFDDITELVTQCRFSDCAHETEPGCAVRAAIEAGALDPERLARWRK
LEAEDRHNSESLAEGRARGRAFTRHIKVTQRGARRRKGG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacctcacgcttaccgacctcggctggtcggaccatttcgcgcgccaactcgaa
gagggcgacacccccgcgcgcattgccgaaatccatcgcacgatcctcgtggcgctcacc
cccgagggccccgtgaagctccttgcgccctccggcgcgggcagctttgccgtgggcgac
tgggtcggaatgcgagacggcgcggcgcgcatgcgcctcgcgccccgcagccagatcgcc
cgcaaggccgccggccacaccgtctcgcgccagctcgtcgccgccaatgtcgacacgctc
ggcatcgtcaccagctgcaacgacgacttcaacccggcgcggctggagcgctacgtggcg
ctggcgatggcgggcgactgcctgccgctggtgatcctcaccaagtccgacatggtggac
gaccccgaaccctacctcgcgcaggcccgcgcgatctcgcccctcgtcgtggcgatggcg
ctcaacgcccgcgatctcgacgacgcggcgcggctcgaaccgtggtgcggaccgggccac
accctggccctcgtcggctcttcgggtgtcggcaagacgacgctccagaacgcgctgacc
ggcggcgccgaggccacggcaggcatccgcgaggatgacgccaagggacgccataccacc
acctaccgggcgctcaggcgctgccgcgccggcggctggctgatcgacacgccgggcatg
cgcgaactgcaactcaccgataccgccgaggggatcgaggagctgttcgacgatatcacc
gaactggtgacgcagtgccggttctcggattgcgcgcacgagaccgaaccgggctgcgcg
gtgcgcgccgccatcgaggcgggcgctctcgaccccgagcgcctcgcccgctggcgcaag
ctggaggccgaggatcgccacaacagcgaaagcctcgcggaagggcgcgcgcgagggcgg
gccttcacccggcacatcaaggtcacccagcgcggggcgaggcgccgcaagggcggttga
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