Limimaricola variabilis: T8T21_13450
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Entry
T8T21_13450 CDS
T09625
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00550
Peptidoglycan biosynthesis
lvr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T8T21_13450
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvr01002
]
T8T21_13450
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
T8T21_13450
Enzymes [BR:
lvr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T8T21_13450
Peptidases and inhibitors [BR:
lvr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
T8T21_13450
Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
T8T21_13450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WPY96085
LinkDB
All DBs
Position
complement(2686964..2688442)
Genome browser
AA seq
492 aa
AA seq
DB search
MASITIATGAVAAPYAAMVVDAKTGQVIHEENADTRLHPASLTKMMTLYIAFQAIQRGEI
GLDSEVTIPSYAAAQPPSKLGLRSGQKIKFRYLLRAAAVKSANDAAAAIGFAISGSEEAF
ARRMNATAQAMGMRNTTFVNQHGLTHPNHLSTARDMTVLGRHMIYDFPQYYNLFSRRTAD
AGMKQVNNTNRRFLDAYKGADGIKTGFTNAAGYNLVASAQRGDRRIIATVFGGTSTANRN
AQVMKLLDKGFASQPGAAPAQAPALVAATPALGPTTGAHTIRVTGVVKRSLRPQIRPGAA
AAAPVQVATASGIEDALAAALLVSSASASTAQPTPAPVAEAVTEAVAVAAAPVTDLSDMA
PETAELFAEAGIAPETTPEARPTEMIMTAAAIAPVDASRMQAVPEVVTRVSTSGGRLWGI
NVGRFNSRGAAERVLIQTALNEPGALDGALRRVTQRSGGFDANFMGLTNEAADLACRRLQ
ARGAMCFMIGPS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtatcaccatcgctaccggcgcggtcgccgcgccttacgcggcgatggtcgtg
gacgccaagacgggccaagtcatccacgaggaaaacgccgatacgaggctgcacccggcc
tcgctgaccaagatgatgaccctctacatcgcgttccaggcgatccagcgcggcgagatc
ggtctcgacagcgaagtgacgattccgtcctatgccgccgcccagccgccctcgaagctg
gggctgcgcagcggtcagaagatcaagttccgctacctgctgcgcgccgccgcggtgaag
tcggccaacgatgccgccgccgccatcggtttcgcgatctccggcagcgaggaggccttt
gcccggcggatgaacgcgaccgcccaggcgatggggatgcgcaacaccaccttcgtcaac
cagcacgggctgacccatccgaaccatttgtcgacggctcgcgacatgaccgtgctgggc
cggcacatgatctacgacttcccgcagtattataacctgttctcgcgccgcaccgccgac
gccggcatgaagcaggtgaacaacaccaaccgccgcttcctcgacgcctataagggcgcg
gacggcatcaagaccggcttcaccaacgccgccggctacaacctcgtggcctcggcccag
cgcggcgaccgccggatcatcgccaccgtcttcggcggcacctcgaccgcgaaccgcaac
gctcaggtgatgaagctgctcgacaagggctttgccagccagcccggcgcagcacccgcc
caagcgccggcgctggtcgcagccaccccggcgctcggcccgaccaccggcgcccacacg
attcgcgtgaccggcgtggtcaagcgcagcctgcggccgcagatccgtccgggcgccgcc
gctgcagcaccggtgcaggtcgccaccgccagcggcatcgaggatgcgctcgccgccgcg
ctgctggtctcctcagcttcggcctccaccgcccagccgacgcccgcaccggtcgccgag
gccgtgaccgaagcggtggccgtcgccgccgccccggtcaccgatctgagcgacatggcc
ccggaaaccgcagagctcttcgccgaagccgggatcgcccccgagaccaccccggaggcg
cgcccgaccgagatgatcatgaccgcggccgccatcgcgccggtcgacgcctcgcggatg
caggcggtgcccgaggtggtgacccgcgtctcgacctccggcggacggctctggggcatc
aatgtcggccgcttcaacagccgcggcgccgccgagcgggtgctgatccagaccgcgctg
aacgagccgggcgcgctcgacggggcgctgcgccgcgtcacccagcgttcgggtggcttc
gacgccaacttcatgggtctcaccaacgaggccgccgacctcgcctgccgccggctgcag
gcccgtggcgccatgtgtttcatgatcggaccgtcctga
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