Limimaricola variabilis: T8T21_13680
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Entry
T8T21_13680 CDS
T09625
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_13680
Transporters [BR:
lvr02000
]
Other transporters
Pores ion channels [TC:
1
]
T8T21_13680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WPY94143
LinkDB
All DBs
Position
complement(2733517..2739090)
Genome browser
AA seq
1857 aa
AA seq
DB search
MKQLSRAAAISIATVAPTMLPAQEEQAERDRGFLTGLIEDNLSGAGREVIITGFKGALSS
AASIEVMTIADEDGVWLRAENLVLDWNRSALLRGRLEVEELSAELIELTRPPQAGPGEPP
AAEATPFSLPELPVSIRLDELSVDRLVLGEAFLDEEVALSLQGSAQLADGEGEARLTAER
LGDRAGRFELSGSYSNESRLLDLTLALEEAEGGIAARALDLPGRPSVALRVEGTGPIDDF
DAAISLATAGQPRIDGRFALDRGEAAEGGPAPLAFSLDVNGDVTPLIAPDYADFFGSDVG
LRVTGSRDETGALALSDLSIEAQALSLDGSARIGADGWPESFDLTGEIASDDGAPVTLPV
AGGETRLGRASLALQFDASVGDQWVLDLTAQDFARPGLTIPQFTVQGGGVIVRESDAAPS
LFTADVDYTARGLRFDDEGLAEALGEQIAGEIVLERDGDGPISIDRVTLAGPGIALNAQG
TVAGSENGFETDTTLSLAAERLERFSELTGLDLAGAADLEIDSTIRPLDGIFDLSLSGST
RDLALGIEPLDPYIDGTGDVAIEAARDETGTRIETLRIATPQMTATAQADITSGASTATF
DIAVENAGLALDGVEGPARLTGTAERDAAGVSRADMVAELPNGRAEIDATQAAEADGGRI
TLDVSAALDDVAPFSTIAGRDLAGAASFTANGTVMPDASTFDLEIDARTTDLVTGIAQAD
PLLRGEVALSGRAIRSGPESFRVENLDLASPSLSATGRAELNGETALFDIEARSSDLTPL
GEAIDRPLSGAVDLSAEGSIRTDLTEADITLDAAATDLVTGVAQADPLLQGRIEIAGHAV
RSGADAFSVEDLVLSAPWIRASGDAALDGTTATFDIEADASDLAPLGAALDRPISGAARI
TAQGSAETDLSGLDASFDAVTVDLATGISQVDPLLEGRVTLSGSATRIGPDSFAVQALRL
DGPAVAAQGDATVTDGAAEFDLDIEARDLAAVGRAVDRPLAGEARLTARGSAALDASTFD
VTLDGRATNLSTGTAQADELFGGALTLSGRAARTGPEDLTVENLRVTSEGLNLAGSALIE
NGEGSFDLDIDIDDLAPVGVLAGRPLAGSVDLTASGSASADLARFDVTLDGTARDVATGI
DQLDPLLAGETVLDARVIRTGPQDFALPRFTLVNPQVRAMGEATVENGLPTGDFDVQLTE
IAPFAPGLSGPATLSANASGDATGGIDFDVTGRAQGTDIAATGRVAPEAQGREITARVSA
DVASLAPFSNLAGRPLGGSLDIDAAGTVMPDLSRFDVTVNGQAADLDVGVEAASRLLAGT
GTIDARLSRSAPGEIAVQDLDLRFPAFSVQADASGSGANQRADFSARLNDIGLFTPDFSG
PVAAQGSVTRDAGGTLGINATATGPGGTRADVAGRYLPDGTLDLDVTGEAQLGLVNDLIE
PRRLEGTARFDLSVEGPPALSSVRGTISTAGAELSVPTVGLTVQNIETTVRLSGDRADLA
LAAALEKGGRINISGPVALTGGFDANLVIALEDLLLRDPELYEATADGRLTVTGPLTGGA
QIAGLVQLGETEIQVPSSGIGALGDLPEVRHVGAPQDVQRTLARAGLTIAGVEIGETSDA
DGPAGPGYGLDVTIRAPSRIFIRGRGLDAELGGELEIGGTTNQVIPVGEFELVRGRLDIL
QQRFELDQGGAYLQGDFSPFIRLVATTETATGTRVRIIIEGPASEPEVRFESTPDLPQDE
VLAQLIFGRDLSSISPLQAVQLAAAVGTLAGRGGGGLIDDFRSDTGLDDLDITTDDEGNA
AVRAGKYLSDNVYTDITVGTDSTSINLNLDVTDDITAQGQVSSDGETSLGIFFERDY
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagctctcccgcgccgccgccatctcgatcgccaccgtcgcgccgaccatgctc
cccgcgcaggaggagcaggccgagcgtgaccgcggctttctcaccggcctgatcgaggac
aatctctcgggcgccgggcgcgaggtgatcatcaccggcttcaagggcgcgctcagctcc
gccgcctcgatcgaggtgatgaccatcgccgacgaggacggcgtctggctccgggccgag
aacctcgtgctcgactggaaccgctcggcgctgttgcgcggacggctggaggtcgaggag
ctgtcggccgagctgatcgagctgacccgtccgccgcaggccgggccgggcgagccgcct
gccgccgaggccacgcccttctcgctgcccgaactgccggtctcgatccggctcgacgag
ctcagcgtcgaccggctggtgctgggcgaggcctttctcgacgaggaggtcgcgctcagc
ctgcagggctcggcgcagctcgccgatggcgagggcgaggcgcggctcaccgccgaacgg
ctgggcgaccgcgctggccggttcgagctgtcgggcagctattccaacgagagccgcctg
ctcgacctgacgctggcgctagaggaggccgagggcggcattgcggcgcgcgcgctcgac
ctgccggggcggccctcggtggcgctccgggtcgagggcaccggcccgatcgacgatttc
gacgccgccatctcgctggccaccgcgggccagccgcgcatcgacggccgcttcgcgctc
gaccgtggcgaggccgccgagggcggccccgcgccgctggccttctcgctcgatgtcaac
ggcgacgtgacaccgctcatcgcgcccgactacgccgatttcttcggctccgacgtgggg
ctgcgggtcacgggttcgcgcgacgagacgggcgcgctggcgctgtcggacctgtccatc
gaggcccaggcgctgagcctcgacggatcggcgcggatcggcgccgatggctggcccgag
agcttcgacctgaccggcgagatcgccagcgatgatggcgcccccgtcaccctgcccgtg
gccgggggagagacccgcctcgggcgcgccagcctcgcgttgcagttcgatgcctcggtc
ggcgaccagtgggtgctcgacctcacggcgcaggatttcgcccgccccgggctgactatc
ccgcagttcaccgtgcagggcggcggtgtcatcgtccgcgaaagcgacgcggcgccgagc
ctgttcaccgccgatgtcgactacaccgcgcgcgggctgcgcttcgacgacgaaggtctg
gccgaggcgctgggcgagcagatcgccggcgaaatcgtgctcgagcgcgacggcgacggc
ccaatctccatcgaccgcgtcacccttgccgggccgggcatcgcgctcaacgcccaaggc
acggtcgccgggtcggagaacggcttcgagaccgacaccacgctcagcctcgcggccgag
cggctggaacggttctctgagctgaccgggctcgacctcgccggcgccgccgatctcgag
atcgacagcacgatccgcccgctcgacggcatcttcgacctgagcctctccggcagcacc
cgggatctcgcactcgggatcgagccgctcgacccctatatcgacggcaccggcgacgtc
gccatcgaggcggcgcgcgacgagaccggcacccggatcgagacgctgcgcatcgccacg
ccgcagatgaccgccacggcgcaggccgacatcacctcgggcgcctcgaccgcgaccttc
gacatcgcggtcgagaatgccggtctggcgctcgacggcgtcgagggtccggcccggctc
accggcacggccgagcgcgacgccgccggcgtcagccgcgccgacatggtggccgagctg
cccaatggccgggccgagatcgatgccacccaggcggccgaggccgatggcggtcggatc
acgctcgacgtgagtgccgcgctcgacgacgtggcccccttctcgaccatcgccggacgc
gacctcgcgggcgccgccagcttcaccgccaatggcacggtgatgcccgacgcctcgacc
ttcgatctggagatcgacgcccggaccaccgatctggtcaccggcatcgcccaggccgac
ccgctgttgcggggcgaggtggcgctgtcgggccgggcgatccgctcgggccccgaaagc
ttccgggtcgagaatctcgatctcgcctcaccctcgctctccgcgaccggccgggccgaa
ttgaacggcgaaaccgcgctgttcgacatcgaggcgcgctcctccgatcttacgcctttg
ggcgaggccatcgaccggccgctttccggcgcggtcgatctgtcggcagagggcagcatc
cggaccgacctgaccgaggccgacatcaccctcgacgccgcggccaccgacctcgtcacc
ggcgtcgcccaggcagacccgctgcttcagggccggatcgagatcgcgggccatgcggtg
cgcagtggcgcggacgccttctcggtcgaggatctggtgctttcggcgccgtggatccgc
gcctcgggcgacgccgcgctcgacggcaccacagccaccttcgacatcgaggccgacgcc
tcggatctcgcgcccctgggggccgcgctcgaccgcccgatctcgggtgccgcgcggatc
accgcccaaggcagcgccgagaccgatctctctggcctcgacgccagcttcgatgcggtc
accgtcgacctcgccaccggcatctcgcaggtcgatccgctgctcgagggccgggtcacg
ctgtcgggcagcgccacgcgtatcggtccggacagctttgccgttcaggcactgcggctc
gatggtccggccgtcgcggcgcagggcgacgccaccgtgaccgatggcgcggccgaattc
gacctcgatatcgaggcgcgcgatctcgccgccgtcgggcgcgccgtcgaccgcccgctg
gcgggcgaggcacgccttaccgcgcgcggctccgccgccctcgacgcctcgaccttcgac
gtcacgctcgatggccgggccacgaacctgtcgaccggcacggcgcaggccgacgagctg
ttcggcggcgcgctcaccctgtcgggccgtgccgcccgcaccggccccgaggatctgacg
gtcgagaacctgcgcgtgacctccgaggggctgaacctcgcgggctcggcgctgatcgaa
aatggcgagggcagcttcgatctcgacatcgacatcgacgacctcgcgcccgtgggcgtt
ctggcgggccgtccactcgcgggctcggtcgatctcaccgcctccggttccgccagcgcc
gatctcgcgcgcttcgacgtgacgctcgacggcaccgcccgcgacgtcgccaccggcatc
gaccagctcgacccgctgctcgcgggcgagaccgtgctcgacgcgcgcgtgatccggacc
ggcccccaggatttcgccctgccccgcttcacgctggtcaacccgcaggtccgcgccatg
ggcgaggcaacggtcgagaacggcctgcccaccggagatttcgacgtccagctgaccgag
atcgcacccttcgcgcccggcctgtcgggtccggccacgctgtcggccaacgcctcgggc
gacgcgactggcggcatcgatttcgacgtcaccggccgcgcacagggcaccgatatcgcc
gccacgggccgggtcgcccccgaggcgcaggggcgcgagatcaccgcgcgggtcagcgcc
gacgttgcatcgcttgcgccgttctcgaaccttgccgggcggccgctgggcggcagcctc
gacatcgacgcggcgggcacggtcatgcccgacctgtcgcgcttcgacgtgaccgtgaac
ggccaggccgcggatctcgatgtcggggtcgaggccgcctcgcgtctgctcgccggcacc
ggcacgatcgacgcgcggctcagccgctcggcccccggcgagatcgcggtgcaggatctc
gacctgcgtttccccgccttctccgtgcaggccgatgccagcggatcgggcgccaaccag
cgcgccgatttcagcgcccggctcaacgatatcggtctgttcacccccgatttcagtggc
cctgtcgcagcgcagggcagcgtcacccgtgacgccggcggcacgctgggcatcaacgcg
accgcgaccggcccgggcggcacccgcgccgacgtcgccggacggtacctgcccgacggc
acgctcgacctcgatgtcaccggggaggcgcagctcgggctcgtcaacgacctgatcgag
ccgcgccggctcgagggcacggcacgcttcgacctctcggtcgagggcccccccgccctc
tcctcggtacgcggcacgatctcgaccgccggtgcggagctttcggtgccgaccgtgggc
ctcacggtgcagaacatcgagaccacggtgaggctgagcggcgaccgcgccgacctcgcg
ctcgcggcggctctggaaaagggcggacggatcaacatctccggcccggtggccctcacc
ggggggttcgatgccaatctggtcatcgcgctcgaggatctgctgctgcgcgaccccgag
ctctacgaggccaccgcggatggacgactgaccgtcacgggccccctgaccggcggcgcg
cagatcgccgggctggtccagctcggtgagaccgagatccaagtcccctcctcgggcatc
ggcgcgctcggtgatctgcccgaggtccgccatgtcggcgcgccgcaggacgtgcagcgg
accctggcccgcgccgggctgaccatcgcgggcgtcgagatcggcgaaacctcggatgcc
gacggcccggcgggccccggatacggcctcgacgtgacgatccgcgcgccgtcgcgcatc
ttcatccgcggccgcggcctcgacgccgagctgggcggcgagctggagatcggcggcacc
accaaccaggtgatcccggtgggcgaattcgaactggtccggggccggctcgacatcctg
cagcagcgcttcgagctcgatcagggcggcgcctatctgcagggcgacttcagccccttc
atccggctggtggccaccaccgagaccgcgaccggcacacgagtgcggatcatcatcgaa
ggccctgccagcgaaccggaggtgcggttcgaatcgacgccggacctgccgcaggacgag
gtgctggcgcagctgatcttcggccgcgacctgtcctcgatctcgccgctgcaggcggtg
caactcgccgcggcggtgggcacattggcggggcgcggtggtggcggcttgatcgacgat
ttccgctccgacaccgggctcgacgacctcgacatcaccaccgacgacgagggcaatgcc
gcggtgcgcgcggggaagtacctgtccgacaacgtctacaccgacatcaccgtcggcacc
gacagcacctcgatcaatctcaacctcgatgtcaccgacgacatcacggcgcagggtcag
gtttcgagcgatggagaaacctcgctcggcatcttcttcgagcgcgattactga
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