Limimaricola variabilis: T8T21_13690
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Entry
T8T21_13690 CDS
T09625
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvr03016
]
T8T21_13690 (truA)
Enzymes [BR:
lvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
T8T21_13690 (truA)
Transfer RNA biogenesis [BR:
lvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T8T21_13690 (truA)
Prokaryotic type
T8T21_13690 (truA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WPY94145
LinkDB
All DBs
Position
complement(2741029..2741802)
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AA seq
257 aa
AA seq
DB search
MPRYALKVEYHGAPFSGWQRQAEHPSVQGAIEAALAKLEKRPHTIAAAGRTDAGVHGIGQ
VAHCDMEKDWDPFRLSEALNFHLKPEPVAITACARVADDFHARFSATWRQYLFRLVTRRA
PLTHDRGLAWQVPHPLDAKAMQEGADRLLGRHDFTTFRSSICQADSAWRTLDRLDVEAVE
GMNGPEIRFHVKARSFLHNQVRSFVGTLERVGAGAWTPDDVSAALEARERAACGPVCPPH
GLYLAAVGYGTDPFDHN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctatgccctcaaggtcgaatatcacggcgcccccttttccggctggcagcgc
caggccgagcacccctccgtgcagggcgcgatcgaggccgcgctcgccaagctggagaaa
cgcccccacaccatcgccgccgccgggcgcaccgatgccggcgtccacgggatcggccag
gtcgcgcattgcgacatggaaaaggactgggacccgttccgcctctccgaggcgctgaac
tttcatctcaagcccgagccggtggcgatcaccgcctgcgcgcgtgtcgctgacgacttc
cacgcgcggttctcggccacctggcggcaatacctgttccggctggtgacgcggcgcgcg
ccgctcacccatgaccgcggtctcgcctggcaggtgccgcacccgctcgacgcgaaggcg
atgcaggaaggggccgaccggctcctcgggcggcacgacttcaccaccttccgctcctcg
atctgccaggcggactcggcgtggcggacgctcgaccggctcgacgtcgaggcggtcgag
ggcatgaacgggccggagatccggtttcacgtgaaggcgcgctccttcctgcacaaccag
gtgcgcagcttcgtcggcacgctggagcgcgtgggcgccggggcctggacgcccgacgac
gtgtcggccgcgctggaggcacgcgagcgcgccgcctgcggcccggtctgtccgccgcac
gggctctatctcgccgccgtcggctacggcacggatcccttcgatcacaattga
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