Limimaricola variabilis: T8T21_13740
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Entry
T8T21_13740 CDS
T09625
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T8T21_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_13740
Enzymes [BR:
lvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8T21_13740
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T8T21_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_22
AAA_30
Flavi_DEAD
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
WPY94155
LinkDB
All DBs
Position
2752316..2754508
Genome browser
AA seq
730 aa
AA seq
DB search
MTTSRFEEGALIGVLTTQPLDRVLDYRAPRGGCAPGDHVEVPFGPRKVNGVVWGPGAGDY
DPAKVKSAIRVLDLPPMRAAMREFLGRVADYTLTPMPAMLRLATRAPGLTDPPGMRKIYR
RGHGQPERMTPARARVLDLLEEHDGLAFLLGELAELAGVGSSVIKGLLTSGAVIEEEAPR
DVAYPTLDPHMPGKPLTGDQAAAAEALRAGIAGGRYGTTLLKGVTGSGKTEVYLEAVAAC
LARGRQALVLLPEIALTAEFLTRVEARFGAKPAEWHSGVTTTERRRCWKMVAENGAQLVV
GARSALFLPFHDLGLIVVDEEHDTSYKQEDGVLYNARDMAVLRASLEKAQVVLASATPSL
ESWVNVQQGKYARLDLESRFGPAVMPEMRAIDMRTEEVPSGSWISPALKGAVMQRLERGE
QSLLFLNRRGYAPLTLCRACGHQIGCKHCDARMVEHRFLKRLMCHQCGETAPMPETCPNC
EVAGKLAAVGPGVERITEEAQALFPDARVTVLSSDLFGSARALKARILEIAEGAADIVVG
TQLVAKGHNFPKLTLVGVIDSDLGLQGSDLRAAERTFQLMRQVAGRAGRAEARGTALLQS
FQPEHPVIRAILSGDEEGFWAAEAAARRAAGVPPYGRMAGIVISSPDMQQAFDLGNRLAR
LDAPLRRIGAQLFGPAPAPIARVRGRHRVRLLVKAEKTAPLQAALAQWAAQVKVPANARL
AIDIDPQSFL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcccgcttcgaggagggcgcgctgatcggcgtgctgaccacccagccgctc
gaccgggtgctggattaccgcgcgccgcgaggcggctgcgcgccgggggaccatgtcgag
gtgccgttcggcccgcgcaaggtgaacggggtggtctggggcccgggcgcgggcgattac
gaccccgccaaggtcaagagcgcgatccgcgtgctcgacctgccgccgatgcgcgccgcg
atgcgcgaattcctcggccgggtcgcggattacacgctcacgccgatgccggcgatgctc
cggttggcgacccgcgcgcccggcctcacagacccgccgggcatgcgcaagatctaccgg
cgtggccacggccagccggagcggatgacgccggcgcgcgcccgggtgctcgacctgctg
gaagagcatgacggactggcattcctcttgggagaactggccgagctggcaggggtcggc
tcctcggtgatcaagggtctcctgacctccggcgcggtgatcgaggaggaggcgccacgc
gacgtggcctatccaaccctcgatccgcacatgcctggcaagccgctgaccggcgaccag
gcggcggcggccgaggccctgcgcgcgggcatcgcgggcgggcggtatggcacgacgctg
ctcaagggcgtcaccggttcgggcaagaccgaggtctatctcgaggcggtggccgcctgt
ctggcccgcggccggcaggcgctggtgttgctgcccgagatcgcgctgacggcggagttt
ctgacccgggtcgaggcgcgcttcggcgccaagcccgcggagtggcattcgggcgtcacc
accaccgagcggcggcgctgctggaagatggtggccgagaacggcgcgcagctggtggtc
ggcgcgcgctcggcgctgttcctgccgttccacgatctcggcctcatcgtcgtcgatgag
gagcacgacacctcctacaagcaggaggacggggtgctctacaacgcgcgcgacatggca
gtgctgcgcgcctcgctcgaaaaggcacaggtggtgctggcctcggccacgccgtcgctg
gagagctgggtcaacgtgcagcagggtaagtacgcgcgcctcgacctcgaaagccgtttc
ggccccgccgtgatgcccgagatgcgcgccatcgacatgcgcacggaggaggtgccctca
ggcagctggatctcgcccgcgctcaagggcgcggtgatgcagcggctggaacgtggcgag
cagtcgctcctgtttctcaaccgccgtggctatgcgccgctgacgctgtgccgcgcctgc
ggccaccagatcggctgcaagcattgcgacgcgcggatggtcgagcaccgctttctcaag
cggctgatgtgccaccaatgcggcgagaccgcgccgatgcccgagacctgcccgaactgc
gaagtggcgggcaagctcgccgcggtggggccgggggtggagcggatcaccgaagaggcg
caggcgctgtttcccgacgcgcgggtgacggtgctcagctcggacctgttcggttcggcc
cgtgcgctcaaggcccgcatcctcgaaatcgccgagggtgcggcggacatcgtcgtcggc
acccagctcgtcgccaagggacacaattttcccaagctgacgctggtgggggtgatcgac
agcgatctcggcctgcagggctcggacctgcgcgcggccgagcgcacgtttcagctgatg
cggcaggtggcgggccgcgcggggcgggccgaggcgcgcggcacggcgctcttgcaaagc
ttccagccggagcacccggtgatccgcgcgatcctgtccggcgacgaggaagggttctgg
gccgccgaggccgccgcgcgccgcgccgccggcgtgccgccctacgggcgtatggcgggg
atcgtgatctcgtccccggacatgcagcaggccttcgatctcggcaaccggctggcccgg
ctcgacgcgccgctgcgccggatcggggcgcagctgttcggaccggccccggcccccatc
gcccgggtgcgcggacggcaccgggtgcggcttctggtcaaggcggagaagactgcgccg
ctgcaggcggcgctggcgcaatgggcggcgcaggtgaaggtccccgccaatgcccggctc
gccatcgacatcgacccgcaaagctttctgtga
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