Limimaricola variabilis: T8T21_14510
Help
Entry
T8T21_14510 CDS
T09625
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lvr
Limimaricola variabilis
Pathway
lvr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
T8T21_14510 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lvr03011
]
T8T21_14510 (rpsA)
Ribosome [BR:
lvr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
T8T21_14510 (rpsA)
Bacteria
T8T21_14510 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
RNase_II_C_S1
S1_2
PCB_OB
TOBE
Motif
Other DBs
NCBI-ProteinID:
WPY96090
LinkDB
All DBs
Position
2902050..2903729
Genome browser
AA seq
559 aa
AA seq
DB search
MCAKASMEEFEALLNESFEIDTPSEGSVVKGRVLAIEAGQAIIDVGYKMEGRIDLKEFAN
PGEQADLKPGDEVEVFLRQVENARGEAVISREMARREEAWDRLEKAYADEERVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILE
ESRAEQRAEVIANLHEGQTVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETVKVQVIKINKETHRISLGMKQLQDDPWDSVEAKFPIESVHTGRVTNITDYGAFVE
LEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEIDSAKRRVSLGLKQTQRNPWE
VFAETHPEGTEVEGEVKNITEFGLFVGLPGDIDGMVHLSDLTWEGRGEDVIGDFRKGDVV
KAKVTEVDIEKERISLSIKAMDGDPFAEAIGGVKRGSIITVEVTKIEDGGIEVTYEGMKS
FIRRSDLSRDRAEQRPERFGVGDKVDVRVTNVDSKTRKLGLSIKAREIAEEKEAVEQYGS
SDSGASLGDILGAALKGDR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctaaagcatccatggaggaattcgaagccctcctgaacgaaagcttcgaaatc
gacacgccgtccgaaggcagcgtcgtcaagggccgcgtgctcgccatcgaggcgggtcag
gccatcatcgatgtcggctacaagatggaaggccgcatcgatctcaaggaattcgccaac
cccggcgagcaggccgacctcaagcccggcgacgaggtcgaagtcttcctccgccaggtt
gagaacgcccgtggcgaagccgtcatctcgcgtgagatggcccgccgcgaagaggcgtgg
gaccgtctcgagaaggcctatgccgacgaagagcgcgtcgaaggcgccatcttcggccgc
gtcaagggtggcttcaccgtcgatctcggcggcgccgtggccttcctgcccggctcgcag
gtcgatgtgcgccccgtgcgcgatgccggcccgctcatgggtctcaagcagccgttccag
atcctcaagatggaccgtcgccgtggcaacatcgtggtgtcgcgtcgcgcgatcctcgaa
gagagccgtgccgagcagcgcgccgaggtcatcgccaacctgcacgaaggccagacggtc
gacggcgtggtcaagaacatcaccgaatacggtgcgttcgttgatctcggcggcgtcgac
ggcctgctgcacgtcaccgacatggcgtggcgccgcgtgaaccacccctcggagatcctg
tcgatcggcgagaccgtcaaggtccaggtcatcaagatcaacaaggaaacccaccgtatc
agcctcggcatgaagcagctgcaggacgatccgtgggattcggtggaagccaagttcccg
atcgagagcgtccacaccggccgcgtgaccaacattaccgactacggcgccttcgtggag
ctggagccgggtgtcgagggtctggtccacgtctccgagatgagctggaccaagaagaac
gtgcaccccggcaagatcgtctccacttcgcaggaagtggaagtgatggtgctcgagatc
gacagcgccaagcgtcgcgtctcgctcggcctgaagcagacccagcgcaacccgtgggaa
gtcttcgccgagacccaccccgagggcaccgaggtcgagggcgaggtgaagaacatcacc
gagttcggcctgttcgtcggcctgccgggcgacatcgacggcatggttcacctgtcggac
ctgacctgggaaggtcgtggcgaggacgtgatcggcgacttccgcaagggcgacgtcgtg
aaggccaaggtcaccgaggtcgacatcgagaaggagcgcatctcgctctcgatcaaggcc
atggacggcgacccgttcgccgaagccatcggtggcgtgaagcgcggctcgatcatcacc
gtcgaggtgaccaagatcgaagacggcggcatcgaagtgacctatgagggcatgaagtcc
ttcatccgtcgctcggatctgtcgcgtgaccgtgccgagcagcgccccgagcgcttcggc
gtcggcgacaaggtcgacgtccgcgtcaccaatgtcgacagcaagacccgcaagctgggc
ctgtcgatcaaggcgcgcgagatcgccgaagagaaggaagcggtcgagcagtacggctcc
tccgattcgggcgcctcgctgggcgacatcctcggcgccgccctcaagggcgaccgctga
DBGET
integrated database retrieval system
