Limimaricola variabilis: T8T21_14860
Help
Entry
T8T21_14860 CDS
T09625
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
lvr
Limimaricola variabilis
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_28
HTH_50
HTH_23
HTH_29
HTH_30
bpMoxR
HTH_38
AAA
Phage_NinH
MCM
AAA_7
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WPY94367
LinkDB
All DBs
Position
complement(2971234..2972604)
Genome browser
AA seq
456 aa
AA seq
DB search
MDKTEGDIAEAARLTARLATARLLVVDDEPGMRNFLVKTLAPHCREVVEADSAEAADALT
ARQLFDVVILDNRMPGRSGLEWLAEQRRRGSLSDTIIMTAFADLDTAIEAMRAGAVDFVL
KPFRSNQLLNAVRRCVELAAMRRENALLRHELATGDPGRSRRARLIGASPQIEEVRQMLE
RVARVPSPVLLTGESGTGKEVAARHLHGLSERAAGPFVPVNCAAIPADMLEIELFGHTRG
AFPGADAPREGLLVSAQGGTVFLDEIGELSASAQTALRRVIEDRAVRPVGSERERPLDIR
LVFATSKNLPEEVAAGRFREDLWFRVNVLEINMPPLRRRGADTVDLARLFVTELSSQLGL
PGIDIDAAARAAILRHDWPGNIRELRNFVERALIFGRFPVEQLNPPPSGPIEPLDDVERR
EILSALEATGGNRAEAARRLGVSRKTIDRKCAAWGL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggataagactgaaggcgacatcgccgaggccgcgcggctgaccgcgcgcctcgccacc
gcgcggctgctcgtcgtcgacgacgagcccggcatgcgcaacttcctcgtcaagacgttg
gcgccgcattgccgcgaggtggtcgaggccgacagcgccgaggccgcggatgcgttgacc
gcgcggcagctcttcgacgtggtgatcctcgacaatcgcatgcccggccgctcggggctg
gaatggctggccgagcagcggcggcgcggcagcctgagcgacacgatcatcatgaccgcc
ttcgccgatctcgacacggcgatcgaggcgatgcgcgccggcgcggtggatttcgtgctc
aagcccttccgctcgaaccagcttctcaatgcggtgcggcgttgcgtcgagctggccgcc
atgcgccgcgagaacgcgctgctgcgccatgagctggccaccggcgatccgggccgctcc
cgccgggcccggctgatcggcgcctcgccgcagatcgaggaagtgcggcagatgctggag
cgcgtcgcccgcgtcccgagcccggttctgctcaccggcgagagcggcaccggcaaggag
gtggcagcgcggcacctgcacggcctgtccgagcgcgcggccggtcccttcgtgccggtc
aattgcgcggcgatccccgccgacatgctggagatcgagttgttcggccatacccgcggc
gcctttccgggcgccgacgccccgcgcgaggggctgctcgtgtcggcgcagggcggcacg
gtgttcctcgatgagatcggcgagctttcggcctcggcccaaaccgcgcttcgccgggtg
atcgaggatcgggccgtgcgcccggtgggcagcgagcgggagcggccgctcgacatccgc
ctcgtgtttgccacctcgaagaacctccccgaggaggtcgcggccggccgcttccgcgag
gatctgtggttccgcgtcaacgtgctcgagatcaacatgccgccactgcggcggcgcggt
gccgacaccgtcgatctcgcccggctcttcgtgacggaactgtcctcgcagctcggcctg
ccggggatcgacatcgacgccgccgcgcgcgccgcgatcctgcgccacgactggcccggc
aacatccgcgagctgcgcaatttcgtcgaacgcgcgctgatcttcgggcgctttccggtc
gaacagctcaacccaccgcccagtggcccgatcgaaccgctcgacgatgtcgagcgtcgc
gagatcctctcggctctcgaggcgaccggtggcaaccgcgccgaggccgcccggcggctc
ggcgtcagccgcaagaccatcgaccgcaaatgcgcggcctgggggctgtga
DBGET
integrated database retrieval system
