Limimaricola variabilis: T8T21_15050
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Entry
T8T21_15050 CDS
T09625
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvr03000
]
T8T21_15050
Transcription factors [BR:
lvr03000
]
Prokaryotic type
Helix-turn-helix
XRE family
T8T21_15050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
HTH_26
YdaS_toxin
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WPY94402
LinkDB
All DBs
Position
complement(3014144..3015541)
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AA seq
465 aa
AA seq
DB search
MAVQKHYAGTQLRELRGRLGLTQKLFAERLGVSLPYLNQMENNNRPVSAGVVLALAREFG
FDVTELTSGEEIRLASDMREALADPVLSGSQPPLSDLRMVAANAPSVARALLDLHAAYRR
AQDRLASFDEALGRAGTTASPWEEVRDFFHYCDNYIDAIDRAAEQFARRAAAEGQDAPEA
AARALEARGITLQERAEGPLRRYDAETRSLTLSSRAPRPTRRFQLLVQLALIEHNQLIEA
TLDLGRFEPGPARDIARIGLANYFAGAALLPYGRFLEAAQQTRHDLELLAERFGASLEQV
AHRLSTLQRPGARGVPFWFVRVDQAGTVTKRHSATQLQFARYGGACPLWNVHQAFETPTR
WLRQLAETPDGVRYLSLARDISGGGGAWGAPVRRFAIGLGCEVKHARELVYADHMDLESA
EAFEPVGISCRICERTNCHQRAVPPLEGRLKVDADLRQDLPYRLE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcagaagcattatgccggcacccagctgcgcgagctgcgcggacggctgggg
ctgacccagaagctctttgccgagcgactcggggtttcgctgccctatctgaaccagatg
gagaacaacaaccgccccgtttcggcgggggtggtactggcgctggcgcgcgagttcggc
ttcgacgtgaccgagctgacctccggcgaggaaatccgattggcctccgacatgcgcgag
gcgctggccgatccggtgctgagcggtagccagccgccactctccgacctgcgcatggtc
gctgccaacgcgccctcggtggcgcgcgccctgctcgatctgcacgccgcctatcgccgc
gcgcaggaccggctggcctccttcgacgaggcgctgggccgggcgggcaccaccgcctcg
ccatgggaggaggtgcgcgacttcttccattattgcgacaactacatcgacgcgatcgac
cgcgccgcagagcagttcgcccgccgcgccgcggccgaggggcaggacgcgcccgaggcg
gcggcgcgcgcgctcgaagcgcgcggcatcaccttgcaggagcgcgccgaggggccgctg
cgccgctacgacgccgagacccgcagcctgaccctgtcgtcgcgcgcaccgcgcccgacc
cggcggttccagctcctggtgcagctcgcgctcatcgagcacaatcagctgatcgaggcc
acgctcgatctggggcggttcgagcccggcccggcgcgggacatcgcccggatcggactg
gccaactacttcgcaggcgcggcgctcctgccctatggccggttcctcgaggccgcgcag
cagacgcgccacgatctcgagctcctggccgagcgcttcggtgccagcctcgagcaggtg
gcgcaccggctttcgaccctgcagcgtcccggtgcgcgcggcgtgccgttctggttcgtg
cgggtggaccaggcgggcaccgtgaccaagcgccattccgcgacccagctgcaattcgcg
cgttatggcggcgcctgcccgctttggaacgtgcatcaggccttcgagacgccgacccgc
tggctgcgccagctcgcggagacgccggatggcgtgcgctacctgtcgctggcgcgcgac
atcagcggtggcggaggggcctggggcgcgccggtgcgacgctttgcgatcgggctgggc
tgcgaagtgaaacatgcgcgcgagctggtctatgccgaccacatggacctcgaatccgcc
gaggccttcgagccggtgggcatctcctgcaggatctgcgaacggacgaactgccaccag
cgcgcggtgcctccccttgaagggcggctgaaggtggacgcggatctgcggcaggatctg
ccctaccggctggagtga
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