Limimaricola variabilis: T8T21_15205
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Entry
T8T21_15205 CDS
T09625
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00541
Biosynthesis of various nucleotide sugars
lvr01100
Metabolic pathways
lvr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T8T21_15205 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lvr01005
]
T8T21_15205 (kdsA)
Enzymes [BR:
lvr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
T8T21_15205 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
lvr01005
]
Lipid A
T8T21_15205 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WPY94432
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All DBs
Position
complement(3046413..3047246)
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AA seq
277 aa
AA seq
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MIDVSIGPLTVGNDHPLTLIAGPCQLESSDHAQMIAGRMAEACAAHGAQFVFKGSYDKAN
RTSLSGKRGLGMEAGLKVLEDVKRAIGCPVLTDIHGADHCVPVAEVADILQIPAFLCRQT
DLLLAAGETGAVINVKKGQFLAPWDMANVAEKIASTGNRRILLTERGVSFGYNTLVADMR
SLPEMMKTGYPVVMDATHSVQQPGGLGGASGGQREFAPVMARAAVSLGIAAVFIETHEAP
DTAPSDGPNMVPLDAMPKLVKTLMGFDRLAKSDPIRL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtctccatcggcccgctcaccgtcggcaacgaccatcccctcaccctgatc
gccgggccgtgccagctcgaatcgtccgaccacgcccagatgatcgccggccgcatggcc
gaggcctgcgcggcacatggcgcgcagttcgtattcaagggcagctacgacaaggccaac
cgcacctcgctttcgggcaagcgcggcctcgggatggaggccgggctcaaggtgctcgag
gacgtcaagcgcgccatcggctgcccggtgctgaccgacatccacggcgccgatcactgc
gtgcctgtcgccgaagtcgccgacatccttcagatcccggccttcctgtgccgccagacc
gacctgctgctggcggcgggcgagaccggggcggtgatcaacgtcaagaagggccagttc
ctcgcgccgtgggacatggccaatgtcgccgagaagatcgcctcgaccggcaaccgccgc
atcctgctcaccgagcgcggcgtctccttcggttacaacacgctagtggccgacatgcgg
tcgctgcccgagatgatgaagaccggctacccggtggtgatggacgcgacccattcggtg
cagcagcccggcgggttgggcggcgcctcgggcggccagcgcgagtttgccccggtgatg
gcgcgcgccgccgtgagcctcggaatcgcggcggtgttcatcgagacccacgaggcgccc
gacaccgccccctcggacggcccgaacatggtgccgctcgacgccatgccgaagctggtc
aagacgctgatgggcttcgatcgcctcgcgaagtccgacccgatccgcctctga
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