Limimaricola variabilis: T8T21_15700
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Entry
T8T21_15700 CDS
T09625
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvr03009
]
T8T21_15700 (rimO)
Enzymes [BR:
lvr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
T8T21_15700 (rimO)
Ribosome biogenesis [BR:
lvr03009
]
Prokaryotic type
ribosomal protein modification factors
T8T21_15700 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
WPY94526
LinkDB
All DBs
Position
complement(3154779..3156158)
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AA seq
459 aa
AA seq
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MQNPPNLRPDLAPKARLVDSPRIGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
AGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYITGTHPRVLAVTG
PHQYEQVLDAVHGAVPPAPDPFIDLLPASGVSLTPRHFSYLKISEGCNHKCKFCIIPDMR
GRLQSRPAHAVMREAEKLVEAGVRELLVISQDTSAYGLDIRHAEERGHRAHITDLARDLG
SLGAWVRLHYVYPYPHVRDLIPLMADPSSGLLPYLDIPFQHGHPDVLKRMARPAASAKTL
DEIAAWRAMCPDITLRSTFIVGYPGETEAEFEYLLDWLDEAQLDRVGCFQYENVAGARSN
DLPDHVPDAVKQERWERFMQKAQAISEAKLQAKVGRHLQVIVDEVDEEAATCRTMADAPE
IDGNLFIDDGHEILKPGDMLTVQVDEAGEYDLWGRMVGS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgccgaatctccgccccgacctcgcccccaaggcgcgcctcgtcgacagt
ccccgcatcggccagccgaccatcggcatggtgtcgcttggctgccccaaggcgctcgtg
gacagcgagcgcatcctgacccggctccgggccgagggctacgccatctcgcccgactat
gccggggccgacgcggtgatcgtcaacacctgcggctttctcgacagcgccaaggccgag
agcctcgatgccatcggcgaggcgcttaaggagaacggcaaggtgatcgtcaccggctgt
ctcggggctgagcccgactacatcaccggcacgcatccgcgcgtcctcgccgtgaccggc
ccgcatcaatacgagcaggtgctcgacgccgtgcacggcgcggtgccgccggcgcccgac
cccttcatcgacctgctgccggcctctggcgtgtcgctgacgccgaggcatttcagctat
ctgaaaatctccgagggctgcaaccacaagtgcaagttctgcatcatccccgacatgcgg
ggacggctgcagtcgcgcccggcgcacgcggtgatgcgcgaggccgagaaactggtggaa
gcgggcgtacgcgagctcctggtgatcagccaggacacctccgcctacggcctcgatatc
cgccatgccgaggagcgcggccaccgcgcccatatcaccgatctggcgcgcgatctgggc
tcgctcggtgcctgggtgcggctgcactacgtctacccctacccgcatgtgcgcgacctg
atcccgctgatggcggatccgtcctcgggcctgctgccctatctcgacatcccgttccag
cacggccacccggacgtgctcaagcgcatggcccggcccgccgcgtccgcaaagacgctc
gacgagatcgcggcctggcgcgcgatgtgcccggacatcaccctgcggtcgactttcatc
gtcggctatcccggcgagaccgaggccgagttcgagtacctgctcgactggcttgacgag
gcgcagctcgaccgtgtcggctgcttccagtacgagaacgttgccggcgcccgctccaac
gacctgcccgaccatgtccccgacgcggtcaagcaggagcgctgggaacgcttcatgcaa
aaggcgcaggcgatctccgaggccaagcttcaggccaaggtcggccgccacctgcaggtc
atcgtcgacgaagtcgacgaggaggccgcgacctgccgtaccatggccgatgcgcccgag
atcgacggcaacctgttcatcgatgacggccacgagattctcaagcccggcgacatgctc
accgtgcaggtcgacgaggccggagagtacgatctctggggccggatggtgggcagctga
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