Limimaricola variabilis: T8T21_15855
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Entry
T8T21_15855 CDS
T09625
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00521
Streptomycin biosynthesis
lvr00523
Polyketide sugar unit biosynthesis
lvr00541
Biosynthesis of various nucleotide sugars
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
lvr01250
Biosynthesis of nucleotide sugars
Module
lvr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T8T21_15855 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
T8T21_15855 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
T8T21_15855 (rfbC)
Enzymes [BR:
lvr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
T8T21_15855 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4360
Motif
Other DBs
NCBI-ProteinID:
WPY96251
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Position
unnamed01:10500..11057
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AA seq
185 aa
AA seq
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MKITETDLPGVLILEPRRFGDDRGWFMESWNRETLRGHGIEIDFVQDNHSYSASRGTVRG
LHYQSPPHAQAKLVRVGRGTVRDVAVDVRRGSETYGCHVAVDLSAENGRQLLVPAGFLHG
FATLTPDVELLYKCSDVYAPDCDGAVAWDDPDLGIDWGIDPATATLSDKDRAAPGFANWT
SPFTA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgagacggacctgcccggcgtgctgatcctcgagccgcgccgcttcggt
gacgatcgtggctggttcatggaaagctggaaccgcgagacgctgcgcgggcatggcatc
gagatcgatttcgtgcaggacaaccactcctactccgcgtcccggggcacggtgcggggc
ctgcactaccagagcccgccgcatgcgcaagccaagctggtccgggtcggccggggcacg
gtgcgcgacgtggccgtcgacgtgcgccgcggctccgagacctacggctgccatgtcgcg
gtcgatctctcggccgagaacgggcggcagctgctggtcccggcgggcttcctgcatggc
ttcgcgacgctgacgccggatgtcgagctgctctacaagtgctcggacgtctacgcgccc
gattgcgacggcgcggtggcctgggacgatcccgatctcggcatcgactggggcatcgac
cccgctaccgccacgctgtcggacaaggaccgcgccgcgccgggcttcgccaactggacc
agccccttcacggcctga
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