Limimaricola variabilis: T8T21_17445
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Entry
T8T21_17445 CDS
T09625
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
lvr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_17445
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
T8T21_17445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_17445
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
T8T21_17445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PRC_RimM
Motif
Other DBs
NCBI-ProteinID:
WPY96534
LinkDB
All DBs
Position
unnamed02:complement(41516..42562)
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AA seq
348 aa
AA seq
DB search
MTSKLKTLLMAGTVLGMANVAMAQDLAPLNSDEEPDRMDWSELDARFGELPAPEAGTAVG
GVSKTLTNEYWRSLGEGYENLAQEYDVKFAYQAAPSEGDQLGQLSIAENMILQGYDALLF
SPQTDNNLQPALETARAQGIPVLNVNDAVIPSVEHYVGNVQRDNGVRVAQWFIDNTEGGK
LAVIEGQPGVFAAGQRTDGFTATIEEAEGFEVVASVPANWSREQAYDAASTILQQHPDLI
GFYANNDGMALGVVEAVKNAGLQEQVAVFGTDGISDAYASIRAGDLTGTVDSFPVLTGEV
AMEVALRLVAGQDLPRVVATPQALITADNIEQYAVEDTAALRDTLLAQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaagctgaagaccctgctgatggcaggcactgttctgggcatggccaatgtc
gccatggcccaggatctcgccccgctcaattccgacgaggagcccgatcggatggactgg
agcgagctcgacgcgcgcttcggcgagctgcccgcgccggaggcgggcactgcggtgggt
ggcgtctccaagacgctgaccaacgaatactggcggtctctgggtgagggttacgagaac
cttgcccaggaatacgacgtgaaatttgcctatcaggccgcaccttcggaaggggatcag
cttggccagctctcgatcgccgagaacatgatcctgcagggctacgacgcgctgctgttc
tcgccgcagactgacaacaacctgcagccggcgctcgagacagcacgtgcgcaaggcatt
cccgtgctcaacgtcaacgacgcggtcattccctcggtcgagcactatgtcggcaacgtg
cagcgcgacaatggcgtgcgcgtggcacagtggttcatcgacaacaccgagggcggcaag
ctcgcggtgatcgaaggccagcccggcgtcttcgccgccggccagcgcaccgatggcttc
acggcgacgatcgaggaggcagagggcttcgaggtggtggccagcgttcccgccaactgg
agccgcgagcaggcctacgacgcggcgtccacaattctgcagcagcatcccgatctgatc
ggcttctatgccaacaacgacggcatggcgctcggcgtggtcgaggcggtgaagaatgcc
ggcctgcaggagcaggtcgcggtgttcggcaccgacggcatctcggacgcctacgcctcg
atccgcgccggtgatctcactggcacggtcgacagcttcccggtgctcaccggagaggtg
gcgatggaggttgcgctgcgtcttgtcgccgggcaggacctgccgcgtgtggtggcaaca
ccgcaagcgttgatcaccgccgacaacatcgagcagtatgctgtcgaggataccgcagcg
ctgcgcgacacgctcctcgcgcagtaa
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