Limimaricola variabilis: T8T21_19025
Help
Entry
T8T21_19025 CDS
T09625
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00260
Glycine, serine and threonine metabolism
lvr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T8T21_19025
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
T8T21_19025
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
T8T21_19025
BRITE hierarchy
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
HI0933_like
NAD_binding_8
FAD_binding_2
DAO
FAD_binding_3
GIDA
Thi4
Pyr_redox
Fer2_BFD
NAD_binding_9
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WPY96638
LinkDB
All DBs
Position
unnamed03:complement(124490..127483)
Genome browser
AA seq
997 aa
AA seq
DB search
MSQFRIPGKGRVDHAKTVRFAFDNREYTGLRGDTVASALLAHGIHLMGRSFKYHRPRGPV
TADSAEPNALIGTSRGPGRFEPNTRATVQELREGLICESQNRLGALSFDFGAVNDALYPL
FPAGFYYKTFMWPRSFWDKLYEPVIRRAAGLGRAPSEVDPDTYASRYLHTDLLVVGAGPS
GLMAALEAARAGVRVTLVDENSEMGGALLSDPGVEIDGRPAWDWLDATLAELASLGVRLM
TRTTAIGYYHQNMIGLCQKLTDHLDEIADNAPRERMWRVRATRVVLAQGALEKPLVFHGN
DRPGVMLAGAAQTYLHRYGVKVGTRAVIVTSHDSAYHAAFDLAAAGTRIVAIVDTRAAPP
ETLRAEARVRGIELLAGHTVTGTRGRLRVASVTVNPVQGGRVGEPRMIHCDCLLMSGGWT
PSLHLFSHTKGSLQWDAQSNTFLPGRMTEDCHIAGAGRGLWGFEAVLADGARAGADAARA
LGKEAEAAPLAVAHDRPGTGESHKELPTDRRSSRVRAFIDFQNDVTAKDIRLAVREGMRS
IEHVKRYTTNGMATDQGKMSNINGLMIAADAVGKAPPEVGLTTFRPPYSPTTFGAFAGYH
RGATFEVTRRTPIDPWAEANGAVFEPVSLWRRAWYFPNGGEDMEAAVARECRATRASVGI
FDASTLGKIEVAGPDAVEFMNRMYTNPWTKLAPGRCRYGVLLGEDGYIRDDGVIGRLSDE
LFHVTTTTGGAPRVLNMMEDYLQTEWPDLDVWLTSTTEQWATVALNGPNARKVLEGLVEG
VDVSAEAMPHMSVAECRVAGFPARLFRLSFTGELGFEINVPARHGLALWEALMEAGKPHD
ITPYGTETMHVLRAEKGFIIVGQDTDGTVTPEDAGLGWAIGKNKPDFVGKRSLARPDLVA
KGRKQLVGLMTEDGGVKLEEGAQIVLDPDQPLPMKMVGHVTSSYHSATLGRSIAMALIEG
GHDMEGRDVYLPMPDGTHRARITSTAFYDPDGSRLKL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagttccgcattcccggcaagggccgggtcgatcacgccaaaaccgtgcgcttc
gccttcgacaatcgcgaatataccggcctgcgcggcgacaccgtcgcctcggcgctgctc
gcccatggcatccacctgatgggccgctcgttcaagtatcaccggccgcgcggcccggtg
acggcggactcggccgagcccaacgcgctgatcggcacctcgcgcgggccggggcggttc
gaaccgaacacccgcgccaccgtgcaggagctgcgcgaggggctgatctgcgagagccag
aaccggctcggcgcgctgtccttcgatttcggcgcggtgaacgatgcgctgtatccgctg
tttccggcggggttctactacaagacattcatgtggccgcgcagcttctgggacaaactt
tacgagccggtgatccgccgcgccgcgggccttggccgcgcgccctcggaggtcgatccc
gacacctacgcctcgcgctacctgcataccgacctgctggtggtgggggcggggccctcg
gggctgatggcggcgctcgaggcggcgcgcgccggggtgcgggtgacgctggtcgacgag
aactcggagatgggcggggcgctcctctccgatccgggcgtcgagatcgacggccggccg
gcctgggactggctcgacgcgacgctggccgaactcgcatccctcggcgtgcggctgatg
acccggaccacggcgatcggctactaccaccagaacatgatcggcctgtgccagaagctc
accgatcatctcgacgagatcgccgacaacgccccgcgcgagcggatgtggcgggtgcgg
gcgacgcgggtggttctggcgcagggcgcgctggagaagccgctggtcttccacggcaac
gaccggcccggcgtgatgctggcgggcgcggcgcagacctatctgcaccgctacggcgtg
aaggtgggcacgcgggcggtgatcgtcacctcgcatgacagcgcctatcacgcggccttc
gatctcgccgccgccgggacccggatcgtcgccatcgtcgacacccgcgcggccccgccc
gagacgctgcgcgccgaggcgcgggtgcgcgggatcgagctgctcgccgggcacaccgtc
accggcacgcgcggacggctgcgggtggcctcggtcacggtgaacccggtgcagggcgga
cgcgtcggcgagccgcggatgatccattgcgactgcctgctgatgtcgggcggctggacc
ccatcgctgcacctgttctcgcacaccaagggcagcctgcaatgggacgcgcagagcaac
accttcctgcccggccggatgaccgaggattgccacatcgccggcgccgggcgcgggctc
tggggcttcgaggccgtgctggccgacggggccagggccggcgccgacgcggcgcgggcg
ctcgggaaagaggcggaggccgcgcccctcgccgtggcgcatgaccgtcccggcaccgga
gagagccacaaggagctgccgaccgatcgcagatcgtcgcgcgtgcgcgccttcatcgac
ttccagaacgacgtgaccgccaaggacatccgcctcgccgtgcgcgaggggatgcgctcg
atcgagcacgtcaagcgctacaccaccaacggcatggcgaccgatcagggcaagatgtcg
aacatcaacgggctgatgatcgccgccgacgcggtgggcaaggcgccgcccgaggtcggt
ctgaccaccttccgcccgccctattcgccgacgaccttcggcgccttcgcgggctaccac
cggggcgccaccttcgaggtgacgcggcgcacgccgatcgatccttgggccgaagcgaat
ggcgcggtgttcgagccggtctcgctgtggcgccgggcatggtacttccccaacggcggc
gaggacatggaggcggcggtggcgcgcgagtgccgcgcaacgcgcgcctcggtcggcatc
ttcgacgcctcgacgctgggcaagatcgaggtggcggggccggatgcggtcgagttcatg
aaccgcatgtacaccaacccctggaccaagctcgcgccgggccgctgccgttacggcgta
ctgctgggcgaggacggctacatccgcgacgacggcgtgatcgggcgtctctcggacgag
ctctttcatgtcaccaccacgacgggcggtgcgccacgcgtgctgaacatgatggaggat
tatctccagaccgaatggcccgatctcgatgtctggctgacctcgaccaccgagcaatgg
gcgaccgtggcgctgaacgggccgaacgcccgaaaggtgctcgaggggctggtcgagggc
gtcgacgtctcggccgaggcgatgccgcacatgtcggtggccgagtgtcgggtcgcgggc
ttccccgcgcggctgttccggctgagcttcaccggcgagctgggcttcgagatcaacgtg
ccggcgcggcatggtctggcgctgtgggaggcgctgatggaggcgggcaagccgcatgac
atcaccccctacggcaccgagacgatgcatgtgctgcgcgccgagaagggtttcatcatc
gtcgggcaggacaccgacggcacggtgacgcccgaggatgcggggctcggatgggcgatc
gggaagaacaagcccgatttcgtcggcaagcggtcgctggcgcggcccgatctggtggcc
aagggacgcaagcagctggtgggcctgatgaccgaggatggcggggtgaagcttgaggag
ggcgcgcagatcgtgctcgaccccgatcagcccctgcccatgaagatggtcggtcatgtc
acctcgtcctatcatagcgcgacgctcggtcggtccatcgccatggcgctgatcgagggt
gggcatgatatggaggggcgcgacgtctatctgccgatgccggacggcacgcaccgggcg
cgcatcacctcgaccgccttctacgaccccgatggcagccggctgaagctctga
DBGET
integrated database retrieval system