Limimaricola variabilis: T8T21_19435
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Entry
T8T21_19435 CDS
T09625
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00362
Benzoate degradation
lvr00624
Polycyclic aromatic hydrocarbon degradation
lvr01100
Metabolic pathways
lvr01120
Microbial metabolism in diverse environments
lvr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
T8T21_19435 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
T8T21_19435 (pcaH)
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
T8T21_19435 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
Motif
Other DBs
NCBI-ProteinID:
WPY96866
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All DBs
Position
unnamed04:4207..4986
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AA seq
259 aa
AA seq
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MSAFQQKQAVTQTPGGHVAPGGGLYARDRAWHPAALTPAYKTSVARSPSRAPISFPTTVS
EETGPVFTRDLLGSLDADLIHNYAKSPEGAIGPRIVVQGRVLDEDGRGVPHSLVEVWQAN
AGGRYRHKKEGYLAPLDPDFGGCGRCITDEFGNYEFRTIQPGPYPWPNGPNDWRPAHIHF
SVFGQSWGQRLITQMYFEGDPMIWHCPIVGTIPSREGIESLVARLDMAATIPMDARVYRF
DIVLRGRRQTLFENRMEGL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgttccagcagaaacaggccgtgacccagacgccgggcggccatgtcgccccc
ggcggcggtctctatgcccgcgaccgcgcctggcacccggcggcgctgaccccggcctac
aagacctcggtggcgcgctcgccttcgcgcgcgccgatctcattcccgacgacggtgagc
gaggagaccggtccggtattcacccgcgacctgctcgggtcgctcgatgccgacctgatc
cacaactatgccaagtcgcccgagggcgcgatcgggccgcggatcgtggtgcaggggcgc
gttctcgacgaggacggacgcggcgtgccgcattcgctggtcgaggtctggcaggctaat
gccggcgggcgctaccgccacaagaaggagggctatctcgccccgctggacccagatttc
ggcggctgcgggcgctgcatcaccgacgaattcggcaactacgagttccgcaccatccag
cccggcccatacccgtggcccaacgggccgaacgactggcgcccggcgcatatacatttc
tcggtcttcgggcagagctggggccaacggctgatcacccagatgtatttcgagggcgat
ccgatgatctggcactgcccgatcgtcggcaccattccctcgcgcgaggggatcgagagc
ctcgttgcccgcctagatatggccgcgacgatcccgatggacgcgcgggtctatcgcttc
gacatcgtgctcagggggcggcggcagaccctgttcgagaaccgcatggaggggctgtaa
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