Limimaricola variabilis: T8T21_19555
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Entry
T8T21_19555 CDS
T09625
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvr03036
]
T8T21_19555
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_19555
Chromosome and associated proteins [BR:
lvr03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
T8T21_19555
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T8T21_19555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
ddrB-ParB
ACDH-11_C
Histone_HNS_N
Hydant_A_C
Motif
Other DBs
NCBI-ProteinID:
WPY96889
LinkDB
All DBs
Position
unnamed04:complement(25514..25864)
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AA seq
116 aa
AA seq
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MSDFDLDDMDLDDLKKLRKAVDRAIQDYQERKRTQARNAAEAAARELGFSLEELVASKGA
KKGRPTSPAKYRNPDDPAQTWSGRGRQPQWMKDAIESGADRDDFLIERFEGGHAAG
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactttgatctggacgacatggatctcgacgacctcaagaaactgcgcaaagcg
gtagatcgggcaatccaggactaccaggaacgcaagcggacgcaggcgcggaatgctgcc
gaagcggctgcgcgtgagttgggcttttcccttgaagagttggttgccagcaagggcgcc
aagaaaggtcgaccgacgtcaccagcgaagtaccgcaatccggacgaccccgcgcagacc
tggtccggccgtggtcgacagccgcaatggatgaaggatgcgatcgaaagcggcgccgac
agagatgacttcctgatcgaacgcttcgaaggcggccatgccgccggctga
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