Yoonia vestfoldensis: LOKVESSMR4R_00046
Help
Entry
LOKVESSMR4R_00046 CDS
T04854
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
lvs
Yoonia vestfoldensis
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvs03032
]
LOKVESSMR4R_00046 (ihfB)
03036 Chromosome and associated proteins [BR:
lvs03036
]
LOKVESSMR4R_00046 (ihfB)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_00046 (ihfB)
DNA replication proteins [BR:
lvs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOKVESSMR4R_00046 (ihfB)
Chromosome and associated proteins [BR:
lvs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LOKVESSMR4R_00046 (ihfB)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LOKVESSMR4R_00046 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ART99394
UniProt:
A0A1Y0E6Z9
LinkDB
All DBs
Position
48052..48339
Genome browser
AA seq
95 aa
AA seq
DB search
MIRSELIAKLHEENRHLTHADVTKVVDAIFETIVNALAAGQRVELRGFGAFTARSYEQQA
GRNPRTGEPIDVPAKRRVYFKRGKRLSDRLNQRDL
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctcggaactcatcgccaagctgcacgaagaaaatcgccacctcacgcatgca
gacgtcaccaaggtggtggatgcgatatttgagacaatcgtgaatgcccttgctgcgggc
caacgtgtcgagctacgcgggttcggcgcctttacagccagatcctatgaacaacaggcc
ggccgcaatccgcgcaccggtgaacccatcgacgtccccgcaaagcggcgtgtttacttc
aaacgaggcaaacggctttctgaccggctgaatcagcgcgatctctga
DBGET
integrated database retrieval system
