Yoonia vestfoldensis: LOKVESSMR4R_00746
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Entry
LOKVESSMR4R_00746 CDS
T04854
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00550
Peptidoglycan biosynthesis
lvs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOKVESSMR4R_00746 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvs01002
]
LOKVESSMR4R_00746 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvs01011
]
LOKVESSMR4R_00746 (dacF)
Enzymes [BR:
lvs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LOKVESSMR4R_00746 (dacF)
Peptidases and inhibitors [BR:
lvs01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LOKVESSMR4R_00746 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
lvs01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LOKVESSMR4R_00746 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ARU00080
UniProt:
A0A1Y0E9J1
LinkDB
All DBs
Position
complement(751990..753564)
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AA seq
524 aa
AA seq
DB search
MARRPGQLAHIGLYFCVLIFILALAPMRGLAAPYAALVMDARTGEVLHARNADTRLHPAS
LTKMMTLYVAFQAIERGEISLDTEVTITSHAANEPPSKLGLRAGQRIRLRYLIRAAAVRS
ANDAATAIGIAISGSEEAFATRMNRTAAAMGMSNTTFRNAHGLTQSGHLSTARDMSILGR
HVIYDFPQYYNLFSRRTADAGVATVQHTNRRWLDSYPGGDGIKTGFTNAAGFTLVASAQR
GDQRIIATVFGGTSTAARNARITELMDMGFSMAPRHANVNRPTPPGAMAEAPADGSIAAG
NSVRGSAGKVIRVNGLVTRSYRPVGRPVTTQPEAEMLLSAAPQESAPAPAPEVDVAVVVE
QDIINAVLADAVNATLMEVLAEEPSAQVAETSVAQASPTVTPQPRPEPPAEMQMVAMAAT
APVAPLAESFTATEPEVVTRVSTSGGRHWGVNVGRYPSRFDAERVLLQVALNEMNTLDGA
LRRVVQRSGGFDANFMGLSRDAADLACRRLQARGTTCFMIGADG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgtccgggacagttggcccatatcgggctgtatttttgcgttctgattttc
attctggcccttgcgccgatgcgcgggcttgccgccccctatgccgcattggtcatggat
gcgcgcaccggcgaggtgctgcatgcgcgcaatgccgatacacggctgcatccggcctct
ttgaccaagatgatgacgctttatgtggcctttcaggcgattgaacgtggtgagatttcg
cttgataccgaggtgacgatcacatcccatgccgccaatgagccgccgtccaaactgggg
ctgcgcgccggtcagcggatccgcctgcgctatctgatccgggccgctgccgtcagatcc
gccaatgacgcggccacggcgatcgggatcgcgatctcggggtccgaagaggcttttgcc
acgcggatgaaccggacagcagccgccatgggcatgtccaacaccacctttcgcaatgcc
catgggctgacgcaatcgggccatttgtcgacggcgcgcgacatgtcgatcctggggcgg
catgtgatctatgatttcccgcaatattataacctgttttcgcgccgcaccgccgatgcc
ggcgtggccacggtgcagcataccaaccgccgctggctggattcctatccgggcggtgac
gggatcaagaccggctttaccaatgcggccggtttcacgctggtcgcctcggcccagcgc
ggcgatcagcggatcatcgcgaccgtgtttggtggcacctcgaccgcggcgcgcaatgcg
cgcatcacagagctgatggatatggggttcagcatggcccctcgccatgccaatgtgaac
cgcccgacaccacccggcgcgatggccgaagcccctgcggacggatccatcgccgcaggc
aatagcgtgcgcggatcggcgggcaaggtgatccgtgtcaacgggcttgtgacccgcagc
taccgccccgttggccgccccgtcacgacgcaaccagaggccgagatgttgctatccgct
gcgccacaggaatccgcccctgcccccgcgccagaggtcgatgtcgccgtggttgtcgaa
caagatatcatcaatgcggtgctggccgatgcggtcaatgccactttgatggaggttctg
gcggaagagccgtccgcgcaagtcgccgagaccagtgtcgctcaggccagtcccaccgtc
accccgcagccccggcccgaaccacccgccgagatgcagatggtcgcaatggccgcgaca
gcaccggtggcgcctctggctgaaagtttcaccgccacagagccagaagttgtcacccgc
gtgtccacctctggcgggcggcattggggcgtgaatgtcggccgttatcccagccgcttt
gacgccgagcgggtgctgctgcaggtcgccttgaacgagatgaatacgctggacggggcg
ctgcgccgtgtcgtgcagcgttctggcgggtttgacgccaatttcatggggctgagccgc
gacgcggctgatctggcctgtcgccggttgcaggcgcgcggcacgacctgtttcatgatc
ggggccgacggctag
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