Yoonia vestfoldensis: LOKVESSMR4R_00998
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Entry
LOKVESSMR4R_00998 CDS
T04854
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00470
D-Amino acid metabolism
lvs00550
Peptidoglycan biosynthesis
lvs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOKVESSMR4R_00998 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOKVESSMR4R_00998 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvs01011
]
LOKVESSMR4R_00998 (murD)
Enzymes [BR:
lvs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LOKVESSMR4R_00998 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lvs01011
]
Precursor biosynthesis
Amino acid ligase
LOKVESSMR4R_00998 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
KARI_N
NAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
AdoHcyase_NAD
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
ARU00327
UniProt:
A0A1Y0E9N7
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Position
990210..991622
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AA seq
470 aa
AA seq
DB search
MIPVQGFAGKSVAVLGMGRSGQAAARALQAGGAQVVVWDDGQAGRDLAEAAGLVLRDLTK
PASYAGITALIVSPGIAHLYPAPHPAIAAAWAAGAPVDNDIGLFFRSFATDDWDGFATTP
RVVAVTGSNGKSTTSALIHHIMAESGRPAQLAGNIGRGVLDIDPARDGEVVVLELSSYQT
DLARAMTPDVAVLTNLTSDHLDRHAGHGGYFAAKRRLFAEGGPDRAVIGVDENEGRYVAN
QLSQGPGDDRVVQVSSGQKLTEAAWSVFARKGFLAEYRHGRQVGSIDLRAIAGLPGAHNH
QNACAAYAVCRTLGLGPRTIEAAMQSYPGLPHRSQLVAERNGVRFVNDSKATNVDSAAKA
LQAFARIRWICGGLQKDGGLDALLPHLPHVAKAYVIGREAADFARQLPGIPAEICTTMAQ
AVALAAAEAEPGDVVLLAPAAASFDQYDNFEQRGADFIACVAAQIADQPG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtgcagggttttgccggcaaaagcgtggcggtgctggggatgggccggtcg
gggcaggctgcggcgcgggccttgcaggccggtggcgcgcaggtcgtggtctgggatgac
ggacaggccgggcgtgatctggccgaagccgcagggctggtcttgcgcgacctgaccaag
cccgcatcctatgccggcatcacagccctgatcgtcagccccggtattgcccatctctac
cctgcgccgcatcctgccatcgccgctgcctgggccgcaggcgcgccggtcgataatgat
atcgggctgtttttccggtcttttgcgacggatgattgggacggctttgccaccaccccc
cgcgtcgttgccgtgaccggatcgaatggcaaatccaccacctcggcgctgatccatcac
atcatggccgaaagcggacgtccggcgcagctggcgggcaatatcgggcgcggcgtgctt
gatatcgaccccgcgcgcgatggcgaggttgtggtgctggaactctcttcctaccagacc
gatctggcgcgcgcgatgacgcccgatgtggcggtgctgaccaatctgacgtccgatcat
ctggaccggcacgccgggcatggcgggtatttcgccgcgaaacggcggctttttgccgaa
ggcggtcccgaccgtgcggtgatcggtgtcgatgaaaacgaaggccgctatgtcgccaac
cagctgtcccaaggaccgggcgacgaccgtgtggtgcaggtctcatcagggcagaaactg
accgaggccgcttggtcggttttcgcgcgcaaggggtttttggcggaataccggcatggc
cggcaggtcgggtccatcgatctgcgcgcgattgcgggcttgcccggtgcgcataaccat
caaaatgcctgtgccgcttatgcggtctgccgcacgctgggtcttggcccgcgcacgatc
gaggcggcgatgcaatcctaccccggcctgccgcaccgcagccagctggtcgcggaacgc
aatggcgtgcgtttcgtcaatgacagcaaggccacgaatgtcgatagcgcggccaaggcg
ctgcaagcctttgcgcggatccgctggatctgtggtggcttgcagaaagacggcgggctg
gacgcgttgttgccgcatctgccccatgtcgccaaggcctatgtcatcggccgcgaggcg
gcggatttcgcccgccaattgccgggcattccggccgagatttgcacgaccatggcacag
gccgtcgcgcttgccgccgccgaggccgaaccgggcgatgtggtgctgctggcgcctgcg
gcggcctcttttgaccaatatgacaatttcgaacagcgcggtgcggatttcatcgcctgt
gtggccgcgcagattgcggatcagcccggctag
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