Yoonia vestfoldensis: LOKVESSMR4R_01064
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Entry
LOKVESSMR4R_01064 CDS
T04854
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00521
Streptomycin biosynthesis
lvs00523
Polyketide sugar unit biosynthesis
lvs00541
Biosynthesis of various nucleotide sugars
lvs01100
Metabolic pathways
lvs01110
Biosynthesis of secondary metabolites
lvs01250
Biosynthesis of nucleotide sugars
Module
lvs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LOKVESSMR4R_01064 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOKVESSMR4R_01064 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOKVESSMR4R_01064 (rfbC)
Enzymes [BR:
lvs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOKVESSMR4R_01064 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF1501
Motif
Other DBs
NCBI-ProteinID:
ARU00392
UniProt:
A0A1Y0EAK5
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All DBs
Position
complement(1065226..1065807)
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AA seq
193 aa
AA seq
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MERDPVQITTTKLPGVLILTPARFGDARGFFSESWNRKTLAAQGITLDFVQDNHSLSAQI
GTIRGLHFQSPPHAQAKLVRCGRGCLFDVVVDIRRGSPSYGHWLGAELSAENGQQILVPA
GFLHGFITRAPDTEIIYKCTDYYAPACDGAVRFDDPDIGIDWGLPAGVAPVLSDKDAAAP
LLRDLDSPFIFEG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagacccggtgcagatcacgacaacaaaactaccgggcgttctgatcctgacc
cctgcccgctttggcgatgcgcgcggcttcttttcggaaagctggaaccgcaagacgctg
gcagcgcaggggatcacgctggatttcgtgcaggataaccattcgctctcggcgcagatt
ggcacgatccgcgggttgcatttccaatcgccgccccatgcgcaggccaaattggtgcgc
tgcggccggggctgtctgtttgatgtggtggtggatatccggcgcggctcgccaagctat
gggcactggctgggcgcggaattatccgctgaaaacgggcagcaaatcctggtccccgcc
ggtttcctgcatgggttcatcacccgcgcgccggatactgaaatcatctataaatgcacg
gattattacgcgcccgcatgtgatggcgcggtccggttcgatgatcctgatatcggcatt
gactggggcctgcctgcgggggttgcgccggtcttgtcagacaaggacgccgccgcaccc
ttgctgcgcgatcttgacagcccgttcatctttgagggttag
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