Yoonia vestfoldensis: LOKVESSMR4R_01276
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Entry
LOKVESSMR4R_01276 CDS
T04854
Symbol
cobB
Name
(GenBank) hydrogenobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00860
Porphyrin metabolism
lvs01100
Metabolic pathways
lvs01240
Biosynthesis of cofactors
Module
lvs_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LOKVESSMR4R_01276 (cobB)
Enzymes [BR:
lvs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
LOKVESSMR4R_01276 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
LOKVESSMR4R_01276 (cobB)
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Motif
Pfam:
GATase_3
AAA_26
CbiA
Motif
Other DBs
NCBI-ProteinID:
ARU00599
UniProt:
A0A1Y0EB26
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Position
complement(1291706..1292977)
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AA seq
423 aa
AA seq
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MRFLISAPASGSGKTTVTLGLLRAFSRTQTIRSAKSGPDYIDPAFHAAASGGPCVNLDAW
AMTPDRIRTLADPAPLIVEGAMGLFDGAPPAGNGSSADLAKILNLPVVLVIDAGRMAGSV
GALAQGFMRYDSALQVAGVILNNVGSARHEAMLRQALQDVTIFGALPRDAALHLGSRHLG
LVQAQERPDLDAFLENAADLMTQHLDLNALQALNAPRPRAGAAHRMTPPAQRIAIAQDAA
FAFAYPHLLDDWRAGGAELQFFSPLADDPVPAVDLIYLPGGYPELHAGQIAGNARFLDSL
RRAQASIYGECGGYMVLGDGLVAADGTRHAMAGLLRLETSFAQRKLHLGYRHLHAAQGPF
AGHWTGHEFHYASTLRAEGRPLFTASDATGAALAPMGLMAGRVAGSFAHLIDASPIASAG
IEA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttctgatcagcgcccccgcctcgggcagcggcaaaaccacggtgactttgggg
ctgttgcgcgccttcagccggacccagacaatccgcagcgccaaatccggccccgattac
atcgaccctgcctttcatgccgcagcctcgggcgggccttgcgtgaacctcgatgcctgg
gcgatgacgcccgaccggatcaggacgctggcagaccccgccccgctgattgtcgaaggc
gcgatgggtctcttcgacggcgcgccgcccgcaggcaacggctccagcgcggatctcgcc
aagatcctgaacctgccggtggtgctggtgatcgacgcagggcggatggcaggatcggtg
ggcgcgctggcgcagggcttcatgcgctatgattccgcgttgcaggtcgcgggggtgatc
ctgaacaatgtaggctccgcccggcacgaagccatgctgcgccaagccttgcaggatgtc
acgatcttcggcgcgctgccgcgcgatgcggccctgcatctgggatcgcggcatctgggg
ctggtgcaggcgcaggaacgccccgatcttgacgctttcctcgaaaacgccgcggatttg
atgacccagcatctggacctgaatgcgctgcaagccctcaacgcgccccggccccgcgcc
ggggccgcgcaccgcatgaccccgcccgcgcaacgcatcgccatcgcccaagacgcggcc
tttgccttcgcctatccgcatctgctggacgactggcgcgcaggcggggcggaattgcaa
ttcttctctcccctcgccgatgatccggtgcccgcggtcgatctgatctatctgcccggc
ggttaccccgaattgcacgcaggccagatcgcgggcaatgcgcggtttctggacagtctg
cgccgcgcgcaggccagcatctatggcgaatgcggcggctatatggtgctgggcgacggg
ctggtcgcggcggatggcacgcggcatgcgatggccgggctgttgcggctggaaacctct
ttcgcgcagcgcaaattacatctgggatatcggcatctgcacgcggcccaaggccccttt
gcagggcattggaccggccatgaattccattatgccagcacgctacgcgccgaaggcagg
ccgctgttcaccgccagcgacgcgaccggtgccgccctggcgcccatggggctgatggcg
gggcgcgtggcgggatcttttgcgcatctgatcgatgcatcgcccattgcctctgccgga
atcgaggcgtag
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