Yoonia vestfoldensis: LOKVESSMR4R_01280
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Entry
LOKVESSMR4R_01280 CDS
T04854
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOKVESSMR4R_01280 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_01280 (alkA)
Enzymes [BR:
lvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LOKVESSMR4R_01280 (alkA)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOKVESSMR4R_01280 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARU00603
UniProt:
A0A1Y0EAM3
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All DBs
Position
1295741..1296370
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AA seq
209 aa
AA seq
DB search
MTLRVITSDACILEGADHLARIEPRFAAIIPALQPLPLRLRPDGFGALLGAIVSQQVSVA
AADAIMRRLAAAGMDDPSAIAAASAEDLRALGLSGQKARYAKALALADLDYPGLHDLPNE
AVIAQLTQVTGIGIWTAEIYAMFALGRADVFAPGDLALQEAARVIFDLPERPRDKALRAM
AEPWAPWRSVAARIMWAYYATIKQREGIR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcgggtgatcacatcggatgcctgtatccttgaaggcgccgatcatctggcg
cggatcgagccgcgctttgccgcgatcatccccgccttgcagcctttgcctttgcggcta
agaccggacggctttggcgcgctgctgggggcgattgtcagccagcaggtcagcgtggcc
gccgctgatgcgatcatgcggcgtttggcggctgcgggtatggatgatccaagcgccatt
gccgctgccagcgcggaggatttgcgcgcgctgggtctgagcgggcaaaaagcgcgctat
gccaaggcgctggcgctggccgatctggattatcccggcctgcatgatctgcccaatgag
gcggtcatcgcccagctgacccaagtgaccggcatcgggatctggacggcggaaatctat
gcgatgttcgcactgggccgggccgatgtctttgcccccggcgatctggccttgcaagag
gcggcgcgggtgatctttgatctgcccgagcggccccgcgacaaggccttgcgcgcgatg
gcggaaccctgggcaccgtggcggtcggttgcggcacggatcatgtgggcctattacgcg
acgatcaagcaacgggaagggatcagatga
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