Yoonia vestfoldensis: LOKVESSMR4R_01914
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Entry
LOKVESSMR4R_01914 CDS
T04854
Symbol
lgrD
Name
(GenBank) linear gramicidin synthase subunit D
Organism
lvs
Yoonia vestfoldensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Epimerase
PP-binding
RmlD_sub_bind
GH3
GDP_Man_Dehyd
Motif
Other DBs
NCBI-ProteinID:
ARU01227
UniProt:
A0A1Y0ECA5
LinkDB
All DBs
Position
complement(1920733..1923543)
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AA seq
936 aa
AA seq
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MHEKPITTVPAQLALALQTHGARKAITDADLSLTYGQLADCIQRIGAHLPDGPVAVFGKP
GTLFGAAVTACVVLGRPFVHLDPAMPQEVLGNILSELGIDLVLLAEPAGPAQLPAHIRNI
DVAQVIAGFADAPPAPIRAADVAPDDIIYLVATSGTTGKPKCIPVTQDAAYLSYLWRDAY
TPYGPDQIVGIYIFAIWEMFRPLRDGAQLCIPRFAELMNPEALLAFLIRHRVTEMLFTPS
AFDKMLQGWTAKAAAGLALRRVILNGEVVTDALITAAQAKLADATLWNLYSICETHDICM
TQVSGQSDPRNAGAVGRAMPYLRAVVLDDHDQPCPPGTPGLLHFEGARMLGPGYVNRPEE
TALRFRAVTIAGQATRLYDTGDQGYVTADGMIHVMGRVAHMLKLRGHSIQTRELTDSLRG
FVDCASALPWVQDVPGQGKALVFYYCADADQSAANRARWGIGAGQVRMPAGLSQALRAEL
PAYCVPAYLVRLEAMPLHPVSGKYDYKALPPITGLVTQDAGGADPRASMAQAALVMGCET
AALDPDLSFHDQGGDSLMAVTFLLALEQHYGRAVDFDFALNVPLGRLHALLSDTAPKIQA
QGRFDRPGLLLTGATGFLGSRVLAAAAQILPQDEVIYCLIRPKRRDPLDRLHAIAAAQGV
DPARLVLVPAGIDAPRFGLCDADYAALANSTRQVIHCAAMVNLAVDRDHMESWSKAGIAT
IVQFCQEAGADLRFSSSSAVFPDQGGRYPEAATTIYPQCSGYGAAKIAAEAQIAASGVPA
AIVRLPSLYDLHAPNPNDIYEIIMAACARMQAVPEGLTFRMIDVAAAAQFLAGLRAPAGL
AYYNLTPDIYTSPPQGMTALPVADWLRDAPLSEAERALIASDLSVLHARATLDHGAAQAM
WMQISGLPCQALSDPAALIQARLGAAARHHKDPALT
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaaagccgataacgaccgtgcctgcgcagcttgcccttgccttgcagacgcat
ggcgcgcgcaaggcgatcaccgatgccgatctatcgctgacctatggccagctggccgat
tgcatccagcggattggcgcgcatctgcctgacgggccggtcgcggtctttggcaaaccc
ggcaccctgttcggggcggcggtcacggcctgcgtcgtgctggggcggcctttcgtgcat
ctggacccggccatgccgcaagaggtgctgggcaacatcctgtcggaacttggcatcgat
ctggtgctgctggcagagcctgccggtccagcccagctgcccgcgcatatccgaaacatt
gatgtggcgcaggtcatcgcgggctttgccgatgcgccgcccgcgccgatccgcgccgcc
gatgtggcgcccgatgacatcatctatctggtcgcgacctcgggcacgacgggcaagccc
aaatgcatccccgtcacgcaggatgcggcctatctgtcctatctgtggcgcgacgcctat
acgccttatgggccggaccagatcgtcggcatctatattttcgcgatctgggaaatgttc
cggcctttgcgcgatggcgcgcagctttgcatcccgcgctttgccgaattgatgaacccc
gaggcgctgctggccttcctgatccgccaccgcgtgaccgagatgctgttcaccccttcg
gcctttgacaagatgctgcaaggctggacggccaaggcggccgccggtctggccctgcgc
cgcgtgatcctgaacggcgaggtggtcactgacgcgctgatcacggcggcgcaagccaag
cttgcggatgcaacattatggaatctttattcaatctgcgaaacgcatgatatctgcatg
acgcaggtatcgggccagtccgacccgcgcaacgccggtgccgtgggcagggccatgccc
tatctgcgcgccgtggtgctggatgatcacgaccagccttgcccgcccggcacccccggc
ctgctgcatttcgaaggcgcgcggatgctgggccccggctatgtcaaccggcccgaggaa
accgcgctgcggtttcgcgcagtgaccatcgcggggcaggcgacgcggctttatgacacc
ggcgaccaaggctatgtgacggcggatggcatgatccatgtcatgggtcgcgtggcgcat
atgctcaaactgcggggtcattcgatccagacgcgcgagctgacagactccttgcgcggc
tttgtggattgcgcctcggctttgccttgggtgcaggatgtgccggggcagggcaaggcg
ctggtgttctattattgcgctgatgctgaccaatctgcggcgaaccgcgcgcgctggggg
atcggcgcagggcaggtgcggatgcctgcggggctgtcgcaggctttgcgcgcggaattg
cccgcctattgcgtgcctgcctatctggtgcggctggaggcgatgccgctgcatccggtg
tcgggcaaatatgattacaaggccttgccgccgattaccggccttgtgacgcaggatgcg
ggcggggccgatccacgggcgagcatggcgcaggcggccttggtgatgggctgcgagaca
gcggcgcttgacccggatctgtcatttcatgaccagggcggcgattcgctgatggcggtg
acctttctgctggcgctggaacagcattacggccgcgcggtcgatttcgatttcgcgctg
aacgtgcctctgggccgtttgcatgcccttttgtccgacacggcccccaagatccaggcg
cagggccggttcgaccgccccggtctgttgctgacgggggcgacggggtttctgggcagc
cgcgtgctggcggcggcggcccagatcttgccgcaggacgaggtgatctattgcctgatc
cgccccaaacgccgcgacccgctggaccggctgcatgctatcgccgctgcgcagggcgtc
gatcctgcgcggctggtgctggtgcctgcgggcattgacgcgccgcgttttgggctgtgc
gatgccgattacgccgccttggccaacagtacccggcaggtgatccattgcgcggcgatg
gtcaatctggcggtggatcgcgaccatatggaaagctggtcaaaggcgggcatcgccaca
atcgtgcaattctgccaggaggccggggccgatctgcggttttcatcctcatcggcggtt
ttccccgatcagggcggccgctatcccgaagcggccaccaccatctacccgcaatgttcc
ggctatggcgcggccaagatcgccgccgaggcgcagatcgcggcatcaggcgtgccggcg
gccatcgtgcggctgccctcgctttatgacctgcatgcgccgaaccccaatgatatctat
gaaatcatcatggcggcctgcgcgcggatgcaagctgtgccagaggggctgacgttccgg
atgatcgatgtggctgccgccgcacagtttctggcagggctgcgcgcgccagcggggctg
gcctattacaacctgacccccgatatctataccagcccgccgcagggcatgacggccttg
cccgtcgcggattggctgcgtgatgcgcccttgtccgaggccgagcgcgccttgatcgcc
agtgatctgtcagtgctgcacgcccgcgcaacgctggatcatggtgccgcgcaggcgatg
tggatgcagatcagcggcctgccatgccaagcgctgtcagaccctgccgcgctgatccag
gcacggctgggcgcggcggcgcgtcaccacaaagacccggcattgacctga
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