Yoonia vestfoldensis: LOKVESSMR4R_01935
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Entry
LOKVESSMR4R_01935 CDS
T04854
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs03030
DNA replication
lvs03430
Mismatch repair
lvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOKVESSMR4R_01935 (dnaX)
03430 Mismatch repair
LOKVESSMR4R_01935 (dnaX)
03440 Homologous recombination
LOKVESSMR4R_01935 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvs03032
]
LOKVESSMR4R_01935 (dnaX)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_01935 (dnaX)
Enzymes [BR:
lvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOKVESSMR4R_01935 (dnaX)
DNA replication proteins [BR:
lvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOKVESSMR4R_01935 (dnaX)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOKVESSMR4R_01935 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
NACHT
NTPase_1
AAA_14
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARU01248
UniProt:
A0A1Y0ECM5
LinkDB
All DBs
Position
complement(1943630..1944736)
Genome browser
AA seq
368 aa
AA seq
DB search
MSDDIIPEPDRLDGAPHPRETPVLYGQQPAEAAFVDAFRAGRMHSGWLITGPRGVGKATL
AWKIATFLLADAPPDMLGEVTLAVPPDHPDARLVQAGAHPRLALIRRPWDDKTGKLRGEI
TVDAVRNLKHFFQMSSADGGRRVVIVDAADEMNRNAANAILKELEEPPAGAVILLVAHQP
SRLLPTIRSRCRELRCGPLTPEDLARALAQAGHSSDNAAGLAALAAGSVGDAIRLLGSGG
MALYADLIRLFGNLPRIDRQAALALAEACSGRGAETRFGLTLDLIDLFLARAARAGLLGA
PATQGAAGEALLLAKIAPDPRAAQAWAQLQQDLSERSRHGRAVNLDPAALILDMIFKIEE
TAQGVAAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgacatcatccccgaacccgaccgtctggacggcgcaccgcatccgcgcgaa
acgccggtgctttatggccagcagcccgccgaagcggcctttgtcgatgcgttccgcgcc
gggcggatgcattcgggctggctgatcaccggcccgcgcggcgtgggcaaggcgacgctg
gcatggaagatcgcgaccttcctgctggccgatgcgccccccgacatgctgggcgaggtg
acgctggccgtgccaccggatcacccggatgcgcggctggtgcaagcgggcgcgcatccg
cgtctggcgctgatccggcggccctgggatgacaagacaggcaagctgcgcggcgaaatc
accgtggatgcggtgcgcaatctgaaacatttcttccagatgtcatctgccgatggcggg
cggcgcgtcgtgatcgtcgatgccgccgacgagatgaaccgcaacgccgccaatgcgatc
ctcaaggaattggaagaaccgcccgcgggggctgtgatcctgctggtggcgcatcaacca
tcaaggctcttgcccacgatccggtcgcgctgccgcgaattgcgctgtggcccgctcacg
cctgaggatctggcgcgcgcgctggcccaggcaggccatagcagcgacaatgcagccggc
cttgccgcgcttgcggctgggtcggtcggtgacgcgatccggctgttgggcagcggtggc
atggcactttacgccgatctgatccggctgttcggtaatctgccccggatcgaccggcag
gccgcgctggccttggccgaggcctgcagcgggcggggggcggaaacccgctttggcctg
acgcttgacctgatcgacctgttcctggcgcgtgcggcgcgtgcgggcttgctgggcgcg
cctgcgacccaaggggcggcgggcgaggctttgctcttggcgaaaatcgcgcccgacccg
cgcgcggcgcaggcctgggcgcagctgcaacaggacctgtccgaaaggtcacgccacggg
cgcgcggtgaaccttgaccctgccgcgctgatccttgatatgatcttcaagatcgaagag
acggcgcaaggcgtcgccgcagcctga
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