Yoonia vestfoldensis: LOKVESSMR4R_02431
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Entry
LOKVESSMR4R_02431 CDS
T04854
Symbol
ddpA
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKVESSMR4R_02431 (ddpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvs02000
]
LOKVESSMR4R_02431 (ddpA)
Transporters [BR:
lvs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LOKVESSMR4R_02431 (ddpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ARU01735
UniProt:
A0A1Y0EDP9
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All DBs
Position
2418950..2420515
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AA seq
521 aa
AA seq
DB search
MKKLLYATALAGTFASGGLPALAQDEVAITVNMVQIIGSIDPAKVSDYTEYMAAVNLYDG
LTTVDPDGNVIPQLAESWEISDDDLTYTFRLKPSATFTDGSPVTAADVVYSVQRLMAIQQ
GASYLFEGIVEPDAVVALDDHTVEFTLTEVYSPFIAVTPLIFVVNQNAVTTNDDDIWGEA
QLAETPLGAGPFTLQSWTRGSEMVLRRNADYHAGWAQNRPIDEVRLVVTRDESTVRALAR
RGELGLSSQYQSTETYDGIAAQDDYRLIEAATATGYYLKLNNQLAPTDDIHVRRAIALAT
DYETIRNVLYPGSVMTGPLASAFADAVPTDATAPVFDLEAARAELEQSPYFTGAPIDLVH
TYVANTAFQEEIALLLTSNLEQIGFRVTIQPEPWNRVTELATSIETTPHFSQVFYGPTYP
SPDSVFYVQYHSDAAGSWASMDWVNDPEVDAMIDASRLETDPDARNAIYRDIGTKLTEDQ
RSVWLLAQQQRHAVHVCLEGFAWVPMQSVEFDFSRYSWTCD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactactttacgcaacagcccttgccgggaccttcgcatcgggggggctgccc
gcccttgcccaggacgaggtcgcgatcaccgtcaatatggtgcagatcatcggcagcatc
gatcccgccaaagtcagcgattacaccgaatatatggccgcggtgaacctgtatgacggg
ctgaccacggtcgatcccgacggcaatgtcatcccgcagcttgccgaaagctgggagatt
tcggacgacgacctgacctatacattccggctgaaacccagtgccacctttaccgatggt
agcccggtcacggcggcggatgtggtctattcggtgcagcgtctgatggcgatccagcaa
ggggccagctatctgttcgaaggcatcgtggaacctgatgccgtggtcgcgctggacgat
cataccgtcgaattcaccctgacagaggtctactcgccctttatcgccgtcaccccgctg
atctttgtcgtgaaccagaacgcggtcacgacaaatgatgatgacatctggggcgaggcg
caattggccgaaaccccgctgggtgccgggcctttcacgctgcaaagctggacgcgcggg
tccgaaatggtgctgcggcgcaatgccgattaccacgccggctgggcacagaaccggccg
atcgatgaggtccggctggtggtcacgcgtgacgaatccaccgtgcgcgcgctggcgcgg
cgcggcgaattggggctgtcgtcgcaatatcaatcgaccgaaacctatgacggcatcgcc
gcccaggacgattaccggcttatcgaggcagcaacagccacgggttattacctcaagctg
aacaaccaactggcccccaccgatgatatccatgtgcggcgggcgattgcgctggccacg
gattacgagacaatccgcaatgtgctttatcccggcagcgtgatgaccgggccgctggcc
agcgcgttcgccgatgcggtgccaacagatgcgacagcgcctgttttcgatctagaggca
gcacgggccgagctggaacaatcgccctatttcaccggcgcgccgattgatctggtgcat
acctatgtcgccaacacggcctttcaggaagaaatcgcattgttgctgacgtcaaacctg
gaacagatcgggtttcgcgtgacgatccagcccgagccgtggaaccgggtgaccgaactg
gccacctcgatcgagaccacgccgcatttcagccaggtcttctatggcccgacctatccg
tcaccggattcggtgttctatgtgcaatatcattctgatgctgcggggagctgggcctcg
atggattgggtaaacgacccagaggtcgatgcgatgatcgacgcctcgcggctggaaacc
gaccccgatgcgcgcaacgcgatctaccgcgacatcggcacgaaactgaccgaggatcag
cggtctgtctggctgctggcgcaacagcaacggcatgcggtgcatgtctgcctggaaggc
tttgcctgggtgccgatgcaaagcgtcgagtttgatttctcgcgctattcatggacctgt
gattga
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